RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 SULT1C2O00338 296 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 KCNK2O95069 426 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 GYPBP06028 91 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 GABRA5P31644 462 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 EMX1Q04741 257 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 HLA-BQ31612 363 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 Q499Y3 187 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 LRRC37A5PQ49AS3 106 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 LIMS2Q7Z4I7 341 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 GDF7Q7Z4P5 450 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 SULF2Q8IWU5 870 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 GLYATL2Q8WU03 294 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 SDF2Q99470 211 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 SPACA1Q9HBV2 294 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 BCL2L10Q9HD36 194 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF226Q9NYT6 803 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 LRFN1Q9P244 771 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 PRELID3BQ9Y3B1 194 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 STRCQ7RTU9 1775 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 RAB19A4D1S5 217 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 C7orf72A4D263 438 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 ARGFXA6NJG6 315 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 MEN1O00255 615 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 BET1O15155 118 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 CPT2P23786 658 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 HTR1FP30939 366 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 MPLP40238 635 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 PSMB10P40306 273 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 FOXK2Q01167 660 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 DUSP8Q13202 625 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 SAXO2Q658L1 398 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 FCRL6Q6DN72 434 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 C12orf45Q8N5I9 185 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 OR1S1Q8NH92 325 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 RHOXF1Q8NHV9 184 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 FNDC9Q8TBE3 224 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 C10orf90Q96M02 699 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 PKMYT1Q99640 499 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 ARL6Q9H0F7 186 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 FKRPQ9H9S5 495 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 UGT2A1Q9Y4X1 527 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 A0A1W2PR48 441 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 TO15178 435 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF254O75437 659 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 OR7C1O76099 320 aaPredicted RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 CBX7O95931 251 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 GABRR1P24046 479 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 NKX2-5P52952 324 aaPredicted RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 F2RL1P55085 397 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 RPL23AP62750 156 aaKnown RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 CAMK2BQ13554 666 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 DUSP5Q16690 384 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 CNIH2Q6PI25 160 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF687Q8N1G0 1237 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 MRGPRX4Q96LA9 322 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 GPR78Q96P69 363 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 PPIL3Q9H2H8 161 aaKnown RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 SLCO5A1Q9H2Y9 848 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 OR2S2Q9NQN1 319 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 SLAMF8Q9P0V8 285 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 C5orf67F2Z3F1 127 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 GLCEO94923 617 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 LGI1O95970 557 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 OR8U9P0C7N5 309 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 FXYD4P59646 89 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 RPL27P61353 136 aaKnown RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 EXOSC6Q5RKV6 272 aaKnown RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 ETFBKMTQ8IXQ9 262 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 SYNPRQ8TBG9 265 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF845Q96IR2 970 aaPredicted RBP8.71□□□□□ -1.01
GARNL3-216ENST00000481242 TMEM59Q9BXS4 323 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 HIPK2Q9H2X6 1198 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 MOB1AQ9H8S9 216 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 SYNPO2LQ9H987 977 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 SIAEQ9HAT2 523 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 NDRG3Q9UGV2 375 aa8.71□□□□□ -1.01
GARNL3-216ENST00000481242 TRAV17A0A0B4J275 112 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 TMEM72A0PK05 275 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 CTRB1P17538 263 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 GPR85P60893 370 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 SRPXP78539 464 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 CTRB2Q6GPI1 263 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 CD300LGQ6UXG3 332 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 MARCH3Q86UD3 253 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 LILRA2Q8N149 483 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 SLC22A24Q8N4F4 322 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 OR6T1Q8NGN1 323 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 OR6Q1Q8NGQ2 317 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 OR2A1Q8NGT9 310 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 OR52N1Q8NH53 320 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 NT5CQ8TCD5 201 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 MAFIPQ8WZ33 124 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
GARNL3-216ENST00000481242 QRSL1Q9H0R6 528 aaKnown RBP8.71□□□□□ -1.02
GARNL3-216ENST00000481242 OCEL1Q9H607 264 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 CHST11Q9NPF2 352 aa8.71□□□□□ -1.02
GARNL3-216ENST00000481242 DECR2Q9NUI1 292 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms