RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 BPIFB6Q8NFQ5 453 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 OR9K2Q8NGE7 335 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 OR5M9Q8NGP3 310 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 FNDC9Q8TBE3 224 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 HDAC2Q92769 488 aaKnown RBP11.88□□□□□ -0.51
LMNA-214ENST00000478063 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 NMNAT3Q96T66 252 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 EMC6Q9BV81 110 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 SF3B5Q9BWJ5 86 aaKnown RBP11.88□□□□□ -0.51
LMNA-214ENST00000478063 MYRFQ9Y2G1 1151 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 SHANK1Q9Y566 2161 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 SLC22A20A6NK97 555 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 KDM4EB2RXH2 506 aaPredicted RBP11.87□□□□□ -0.51
LMNA-214ENST00000478063 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 PTGS2P35354 604 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 CDKN2AP42771 156 aaKnown RBP11.87□□□□□ -0.51
LMNA-214ENST00000478063 CLDN17P56750 224 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 RBM48Q5RL73 367 aaKnown RBP11.87□□□□□ -0.51
LMNA-214ENST00000478063 NIPAL3Q6P499 406 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 CREB3L2Q70SY1 520 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 HDDC2Q7Z4H3 204 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 FGD2Q7Z6J4 655 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 GID4Q8IVV7 300 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 BBS1Q8NFJ9 593 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 OR9Q1Q8NGQ5 310 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 ZPLD1Q8TCW7 415 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 RNF128Q8TEB7 428 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 ABHD3Q8WU67 409 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
LMNA-214ENST00000478063 ZNF582Q96NG8 517 aaPredicted RBP11.87□□□□□ -0.51
LMNA-214ENST00000478063 HCAR1Q9BXC0 346 aa11.87□□□□□ -0.51
LMNA-214ENST00000478063 H2AFY2Q9P0M6 372 aaPredicted RBP11.87□□□□□ -0.51
LMNA-214ENST00000478063 ZZEF1O43149 2961 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SH3D21A4FU49 640 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SLC35F4A4IF30 521 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 OR6C68A6NDL8 312 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SNTNA6NMZ2 147 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 ZNF726A6NNF4 738 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 M0R3G1 203 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 PRODHO43272 600 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 AKAP8O43823 692 aaKnown RBP11.86□□□□□ -0.51
LMNA-214ENST00000478063 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 AQP8O94778 261 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 CCDC159P0C7I6 412 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 TDGF1P3P51864 188 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SLC16A1P53985 500 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 CDH11P55287 796 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 CXCR4P61073 352 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 RPS7P62081 194 aaKnown RBP11.86□□□□□ -0.51
LMNA-214ENST00000478063 CAMK2DQ13557 499 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 KLHL12Q53G59 568 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SLC25A30Q5SVS4 291 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 AADACL4Q5VUY2 407 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 NXNL2Q5VZ03 156 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 CARD17Q5XLA6 110 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 NHLRC1Q6VVB1 395 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 P4HA3Q7Z4N8 544 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 MCEMP1Q8IX19 187 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 NPEPL1Q8NDH3 523 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 RFKQ969G6 155 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 ADAD1Q96M93 576 aaKnown RBP11.86□□□□□ -0.51
LMNA-214ENST00000478063 ZNF385AQ96PM9 386 aaKnown RBP11.86□□□□□ -0.51
LMNA-214ENST00000478063 TRIB1Q96RU8 372 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SLX1AQ9BQ83 275 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 YTHDF1Q9BYJ9 559 aaKnown RBP11.86□□□□□ -0.51
LMNA-214ENST00000478063 OR51V1Q9H2C8 321 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 RERGLQ9H628 205 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 RPRD1BQ9NQG5 326 aaKnown RBP11.86□□□□□ -0.51
LMNA-214ENST00000478063 ASF1BQ9NVP2 202 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 SCN3BQ9NY72 215 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 KLHL9Q9P2J3 617 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 BLOC1S6Q9UL45 172 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 ZNF175Q9Y473 711 aa11.86□□□□□ -0.51
LMNA-214ENST00000478063 INTS1Q8N201 2190 aaKnown RBP11.85□□□□□ -0.51
LMNA-214ENST00000478063 BOD1L1Q8NFC6 3051 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 PRSS37A4D1T9 235 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 TTLL8A6PVC2 850 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 TRMUO75648 421 aaKnown RBP11.85□□□□□ -0.51
LMNA-214ENST00000478063 IGHG1P01857 330 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 GYPBP06028 91 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 TPOP07202 933 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 LYNP07948 512 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 CLUP10909 449 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 FCGR2AP12318 317 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 ABOP16442 354 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 EEF1B2P24534 225 aaKnown RBP11.85□□□□□ -0.51
LMNA-214ENST00000478063 CLRN1P58418 232 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 CSNK2BP67870 215 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 ZNF91Q05481 1191 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 RUNX1T1Q06455 604 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 DBPQ10586 325 aaPredicted RBP11.85□□□□□ -0.51
LMNA-214ENST00000478063 APOFQ13790 326 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
LMNA-214ENST00000478063 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 SYT14Q8NB59 555 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 NOXO1Q8NFA2 376 aa11.85□□□□□ -0.51
LMNA-214ENST00000478063 OR6X1Q8NH79 312 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms