RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 IGLV11-55A0A075B6I3 123 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 IGKV2-28A0A075B6P5 120 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CIB4A0PJX0 185 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 PRSS37A4D1T9 235 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 H3BNH8 94 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 MED6O75586 246 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 UPK3AO75631 287 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 IGKV2D-28P01615 120 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 IGLV2-23P01705 113 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 IGHV3-43DP0DP04 118 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CD1CP29017 333 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 ATP5C1P36542 298 aaKnown RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 FDFT1P37268 417 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 EPS15P42566 896 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 GPR6P46095 362 aaPredicted RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 GYG1P46976 350 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 NPBWR2P48146 333 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 TFPI2P48307 235 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CEBPDP49716 269 aaPredicted RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 ZNF136P52737 540 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 ACTR1AP61163 376 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CASC1Q6TDU7 716 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 LRRC31Q6UY01 552 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 EFL1Q7Z2Z2 1120 aaKnown RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 TGIF2LXQ8IUE1 241 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 PCP2Q8IVA1 136 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 SAXO1Q8IYX7 474 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 PUSL1Q8N0Z8 303 aaKnown RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 TPRX1Q8N7U7 411 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CYB561D1Q8N8Q1 229 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 ZNF557Q8N988 423 aaPredicted RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 TRPV1Q8NER1 839 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 SLC22A8Q8TCC7 542 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CD300LFQ8TDQ1 290 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 GEMIN6Q8WXD5 167 aaKnown RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 MED8Q96G25 268 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 AURKBQ96GD4 344 aaPredicted RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 PLEKHA8Q96JA3 519 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 BMFQ96LC9 184 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CNN2Q99439 309 aaKnown RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 SORT1Q99523 831 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 SLC39A3Q9BRY0 314 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 CRACR2AQ9BSW2 395 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 FAIM2Q9BWQ8 316 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 GABARAPL3Q9BY60 117 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 UGT1A7Q9HAW7 530 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 UGT1A10Q9HAW8 530 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 UGT1A8Q9HAW9 530 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 SGK2Q9HBY8 427 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 TM9SF3Q9HD45 589 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 LHX9Q9NQ69 397 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 PACSIN2Q9UNF0 486 aaPredicted RBP2□□□□□ -2.09
TARDBP-208ENST00000477447 N6AMT1Q9Y5N5 214 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 NOTCH2Q04721 2471 aa2□□□□□ -2.09
TARDBP-208ENST00000477447 NFASCO94856 1347 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 FRMPD3Q5JV73 1810 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 HAS3O00219 553 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 XKRYO14609 159 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 ANGPTL7O43827 346 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 MGRN1O60291 552 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 B4GALT2O60909 372 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 ERLIN2O94905 339 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 BGLAPP02818 100 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 FGF1P05230 155 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 UBTFL1P0CB47 393 aaPredicted RBP1.99□□□□□ -2.09
TARDBP-208ENST00000477447 ATP1B2P14415 290 aaPredicted RBP1.99□□□□□ -2.09
TARDBP-208ENST00000477447 HSD17B2P37059 387 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 YAP1P46937 504 aaKnown RBP1.99□□□□□ -2.09
TARDBP-208ENST00000477447 NCBP2P52298 156 aaKnown RBP eCLIP1.99□□□□□ -2.09
TARDBP-208ENST00000477447 HMGCS1Q01581 520 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 AQP6Q13520 282 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 TTLL9Q3SXZ7 439 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 LYPD2Q6UXB3 125 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 LRRC74BQ6ZQY2 392 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 H2BFWTQ7Z2G1 175 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 ZNF679Q8IYX0 411 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 TBC1D21Q8IYX1 336 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 BHLHE23Q8NDY6 225 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 OR10G2Q8NGC3 310 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 OR8J1Q8NGP2 316 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 OR2G2Q8NGZ5 317 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 LRRC58Q96CX6 371 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 IFT74Q96LB3 600 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 C12orf42Q96LP6 360 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 ROPN1BQ9BZX4 212 aaPredicted RBP1.99□□□□□ -2.09
TARDBP-208ENST00000477447 IFI27L2Q9H2X8 130 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 ANKRD19PQ9H560 264 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 NIPAL2Q9H841 368 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 NECAP2Q9NVZ3 263 aa1.99□□□□□ -2.09
TARDBP-208ENST00000477447 F11RQ9Y624 299 aaKnown RBP1.99□□□□□ -2.09
TARDBP-208ENST00000477447 MSH6P52701 1360 aa1.98□□□□□ -2.09
TARDBP-208ENST00000477447 PPIAL4EA0A075B759 164 aa1.98□□□□□ -2.09
TARDBP-208ENST00000477447 IGKV1D-13A0A0B4J2D9 117 aa1.98□□□□□ -2.09
TARDBP-208ENST00000477447 PLAC8L1A1L4L8 177 aa1.98□□□□□ -2.09
TARDBP-208ENST00000477447 ERVV-1B6SEH8 477 aa1.98□□□□□ -2.09
TARDBP-208ENST00000477447 GOSR2O14653 212 aa1.98□□□□□ -2.09
TARDBP-208ENST00000477447 SURF6O75683 361 aaKnown RBP1.98□□□□□ -2.09
TARDBP-208ENST00000477447 WISP3O95389 354 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms