RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 OGFOD2Q6N063 350 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 NET1Q7Z628 596 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-214ENST00000477152 GPR137CQ8N3F9 429 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CADM2Q8N3J6 435 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF781Q8N8C0 355 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 NUP37Q8NFH4 326 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 OR1K1Q8NGR3 316 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 OR52P1PQ8NH57 321 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CNOT9Q92600 299 aaKnown RBP6.31□□□□□ -1.4
BRCA1-214ENST00000477152 PPP1R36Q96LQ0 422 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TMEM109Q9BVC6 243 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF442Q9H7R0 627 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 EVA1AQ9H8M9 152 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CHODLQ9H9P2 273 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 DYNLRB1Q9NP97 96 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CA10Q9NS85 328 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ADPRHL2Q9NX46 363 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 USP22Q9UPT9 525 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 RCE1Q9Y256 329 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 NOX1Q9Y5S8 564 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CADP27708 2225 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 A0A0G2JPF8 293 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 WDR91A4D1P6 747 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 HNRNPCL2B2RXH8 293 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 HNRNPCL3B7ZW38 293 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 C5orf58C9J3I9 102 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 HNRNPCL1O60812 293 aaKnown RBP6.31□□□□□ -1.4
BRCA1-214ENST00000477152 AKR7A3O95154 331 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 LY86O95711 162 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CHRM4P08173 479 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 HNRNPCL4P0DMR1 293 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 IDO1P14902 403 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CRATP43155 626 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 RPS23P62266 143 aaKnown RBP6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SYPL1Q16563 259 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 KRT71Q3SY84 523 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 FAM120AOSQ5T036 256 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 RNF220Q5VTB9 566 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 HHATQ5VTY9 493 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 C1orf140Q5VVS0 124 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TMEM200BQ69YZ2 307 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 NIPAL3Q6P499 406 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 B3GLCTQ6Y288 498 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 MSANTD1Q6ZTZ1 278 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CREB3L2Q70SY1 520 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 CLEC4FQ8N1N0 589 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 PRR18Q8N4B5 295 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TMEM99Q8N816 258 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 PIK3C3Q8NEB9 887 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 MFSD8Q8NHS3 518 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 MGARPQ8TDB4 240 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SLC38A4Q969I6 547 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 C3orf49Q96BT1 292 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SPATA5L1Q9BVQ7 753 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 C19orf24Q9BVV8 132 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SLC38A1Q9H2H9 487 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 DENND2DQ9H6A0 471 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-214ENST00000477152 MEAF6Q9HAF1 191 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 C12orf10Q9HB07 376 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 KCNK9Q9NPC2 374 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 A0A096LNT2 108 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 CDHR4A6H8M9 788 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 VWC2LB2RUY7 222 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 AP3D1O14617 1153 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 AIM2O14862 343 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 TYROBPO43914 113 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 OR4A8P0C604 315 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 PNMTP11086 282 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 CBR1P16152 277 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 RPS4Y1P22090 263 aaKnown RBP6.3□□□□□ -1.4
BRCA1-214ENST00000477152 EDNRAP25101 427 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 ETV4P43268 484 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 SELENOVP59797 346 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 DSTNP60981 165 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 NCALDP61601 193 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 IL1RL1Q01638 556 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 NAAAQ02083 359 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 VMACQ2NL98 169 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 ATG16L1Q676U5 607 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 KRT73Q86Y46 540 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 ANKFN1Q8N957 763 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 LINC01356Q8N9X3 169 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-214ENST00000477152 DNAJA3Q96EY1 480 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 ITCHQ96J02 903 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 OXGR1Q96P68 337 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 EPYCQ99645 322 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 NUF2Q9BZD4 464 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 PLK3Q9H4B4 646 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 AIG1Q9NVV5 245 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 CRNNQ9UBG3 495 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-214ENST00000477152 HAO1Q9UJM8 370 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 SLC13A4Q9UKG4 626 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 CMAHPQ9Y471 501 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
BRCA1-214ENST00000477152 IGHV1-18A0A0C4DH31 117 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 RPL36A-HNRNPH2H7BZ11 118 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 hCG_2039718K7EN88 272 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms