RNA–Protein interactions for RNA: ENST00000477100.1

TRBVB-201, Transcript of T cell receptor beta variable B (pseudogene), humanhuman

BASIC

Gene TRBVB, Length 408 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVB-201ENST00000477100 CFDP1Q9UEE9 299 aaPredicted RBP0.32□□□□□ -2.36
TRBVB-201ENST00000477100 CTNNA3Q9UI47 895 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 MAD2L2Q9UI95 211 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 XPO7Q9UIA9 1087 aaKnown RBP0.32□□□□□ -2.36
TRBVB-201ENST00000477100 MRC1P22897 1456 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 SCN7AQ01118 1682 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 QRICH2Q9H0J4 1663 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 KNDC1Q76NI1 1749 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 PARP4Q9UKK3 1724 aaKnown RBP0.32□□□□□ -2.36
TRBVB-201ENST00000477100 TOGARAM1Q9Y4F4 1720 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 NFAT5O94916 1531 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 TOP2AP11388 1531 aaKnown RBP0.32□□□□□ -2.36
TRBVB-201ENST00000477100 ARHGAP5Q13017 1502 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 YLPM1P49750 1951 aaKnown RBP0.32□□□□□ -2.36
TRBVB-201ENST00000477100 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
TRBVB-201ENST00000477100 F5P12259 2224 aa0.32□□□□□ -2.36
TRBVB-201ENST00000477100 CHD3Q12873 2000 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ANK2Q01484 3957 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DCCP43146 1447 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 PKHD1P08F94 4074 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DLG5Q8TDM6 1919 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 HECTD4Q9Y4D8 3996 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DDX60LQ5H9U9 1706 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 CLRN2A0PK11 232 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 PLAC8L1A1L4L8 177 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 H7C0S8 307 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DNASE2O00115 360 aaPredicted RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ZNF263O14978 683 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 TPST2O60704 377 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DKC1O60832 514 aaKnown RBP eCLIP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ATP6V1G1O75348 118 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 LGI1O95970 557 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 APOA4P06727 396 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SLC26A3P40879 764 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 HTR5AP47898 357 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ACTG1P63261 375 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SYCNQ0VAF6 134 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 CIRBPQ14011 172 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 RFX4Q33E94 735 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 IFI44LQ53G44 452 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 BOLA3Q53S33 107 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 LRRC10Q5BKY1 277 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ZFAND6Q6FIF0 208 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 TMEM225Q6GV28 225 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SHQ1Q6PI26 577 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ACOT7LQ6ZUV0 252 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 WDR86Q86TI4 376 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 NECAP1Q8NC96 275 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 OR10G9Q8NGN4 311 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 RNASE8Q8TDE3 154 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 TSEN15Q8WW01 171 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 FGF11Q92914 225 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DCPSQ96C86 337 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SLC25A36Q96CQ1 311 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 BAG1Q99933 345 aaPredicted RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SULT4A1Q9BR01 284 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 NFKBIZQ9BYH8 718 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SELENOIQ9C0D9 397 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 POLR3FQ9H1D9 316 aaPredicted RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 REEP1Q9H902 201 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 GPN2Q9H9Y4 310 aaPredicted RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 DNAJB9Q9UBS3 223 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 CRLS1Q9UJA2 301 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 MRPS33Q9Y291 106 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 HEBP2Q9Y5Z4 205 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 MUC22E2RYF6 1773 aaPredicted RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 KDM3BQ7LBC6 1761 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 FANCMQ8IYD8 2048 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SIPA1L1O43166 1804 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SIP14410 1827 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 SBF2Q86WG5 1849 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 NSD2O96028 1365 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 LRPPRCP42704 1394 aaKnown RBP0.31□□□□□ -2.36
TRBVB-201ENST00000477100 ZGRF1Q86YA3 2104 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 KIAA0232Q92628 1395 aa0.31□□□□□ -2.36
TRBVB-201ENST00000477100 CSMD3Q7Z407 3707 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 NCOA2Q15596 1464 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 PRXQ9BXM0 1461 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 A0A1B0GVX0 72 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 FCN1O00602 326 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 CHST1O43916 411 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 CCNKO75909 580 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 HSPA4LO95757 839 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 IL4P05112 153 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 PDHBP11177 359 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 ATP5A1P25705 553 aaKnown RBP0.3□□□□□ -2.36
TRBVB-201ENST00000477100 DLX1P56177 255 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 HMGCS1Q01581 520 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 EWSR1Q01844 656 aaKnown RBP eCLIP0.3□□□□□ -2.36
TRBVB-201ENST00000477100 CDC20Q12834 499 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 TFDP1Q14186 410 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 ARL6IP1Q15041 203 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 NDUFA9Q16795 377 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 FUT11Q495W5 492 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 ATL3Q6DD88 541 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 FAM199XQ6PEV8 388 aaPredicted RBP0.3□□□□□ -2.36
TRBVB-201ENST00000477100 TMIGD1Q6UXZ0 262 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 FAM92BQ6ZTR7 304 aa0.3□□□□□ -2.36
TRBVB-201ENST00000477100 LRRC70Q7Z2Q7 622 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms