RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 LRR1Q96L50 414 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF48Q96MX3 618 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 CCDC115Q96NT0 180 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 NUP50Q9UKX7 468 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 CACNG2Q9Y698 323 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 PPIAL4EA0A075B759 164 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 PPIAL4CA0A0B4J2A2 164 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 CCDC154A6NI56 674 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SMIM23A6NLE4 172 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 CLDN25C9JDP6 229 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 PPIAL4DF5H284 164 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 CLDN34H7C241 214 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 UBL3O95164 117 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 HPRP00739 348 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SERPINA5P05154 406 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 PPIAL4FP0DN26 164 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 HLA-DOBP13765 273 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF250P15622 560 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 MDKP21741 143 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 GRPRP30550 384 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 GCH1P30793 250 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 LSP1P33241 339 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SERPINB5P36952 375 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 ANXA11P50995 505 aaKnown RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 KLF3P57682 345 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SELENOVP59797 346 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SLC9A3R2Q15599 337 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 KLF17Q5JT82 389 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 RNF220Q5VTB9 566 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 LEG1Q6P5S2 330 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 NHLRC1Q6VVB1 395 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 H1FNTQ75WM6 255 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF771Q7L3S4 317 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 PAQR4Q8N4S7 273 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 FGFBP3Q8TAT2 258 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 EPS8L3Q8TE67 593 aaKnown RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SNX33Q8WV41 574 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 GTF3AQ92664 365 aaKnown RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 RAB1CQ92928 201 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 POP5Q969H6 163 aaKnown RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 TAAR8Q969N4 342 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 TIMD4Q96H15 378 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 GPA33Q99795 319 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 FOXB1Q99853 325 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 EMC6Q9BV81 110 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 AKTIPQ9H8T0 292 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 MKS1Q9NXB0 559 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SLCO1C1Q9NYB5 712 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 PLEK2Q9NYT0 353 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 SLC17A7Q9P2U7 560 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 BTNL2Q9UIR0 455 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 GPR160Q9UJ42 338 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 FBXL3Q9UKT7 428 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF443Q9Y2A4 671 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-213ENST00000476777 POFUT2Q9Y2G5 429 aa9.65□□□□□ -0.86
BRCA1-213ENST00000476777 KMT2CQ8NEZ4 4911 aaKnown RBP9.64□□□□□ -0.87
BRCA1-213ENST00000476777 SLC22A23A1A5C7 686 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 MS4A18H0YCH9 400 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 OR2T1O43869 369 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 PATE4P0C8F1 98 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 FAM157BP0CG42 384 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 CDKN2CP42773 168 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 ERVS71-1P61550 626 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 HOXC5Q00444 222 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 SRSF4Q08170 494 aaKnown RBP9.64□□□□□ -0.87
BRCA1-213ENST00000476777 DPY19L1Q2PZI1 675 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 HFEQ30201 348 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 MS4A18Q3C1V0 323 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 ARMCX4Q5H9R4 360 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 FAM69AQ5T7M9 428 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 C6orf89Q6UWU4 347 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 UEVLDQ8IX04 471 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 IFT20Q8IY31 132 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 LRRC34Q8IZ02 419 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 TRIML2Q8N7C3 387 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 ADPRHL1Q8NDY3 354 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 MNS1Q8NEH6 495 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 SYNPRQ8TBG9 265 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 PNPT1Q8TCS8 783 aaKnown RBP9.64□□□□□ -0.87
BRCA1-213ENST00000476777 APOPT1Q96IL0 206 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 TXNDC15Q96J42 360 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 PPP1R36Q96LQ0 422 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 ZIM3Q96PE6 472 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 GAL3ST1Q99999 423 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 PPCSQ9HAB8 311 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 SAP30LQ9HAJ7 183 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 B3GAT2Q9NPZ5 323 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 MMP26Q9NRE1 261 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 DECR2Q9NUI1 292 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 PDP1Q9P0J1 537 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-213ENST00000476777 LEF1Q9UJU2 399 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-213ENST00000476777 PURGQ9UJV8 347 aaKnown RBP9.64□□□□□ -0.87
BRCA1-213ENST00000476777 MMP24Q9Y5R2 645 aa9.64□□□□□ -0.87
BRCA1-213ENST00000476777 DOCK11Q5JSL3 2073 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 IGKV1D-42A0A075B6H8 117 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 E9PBE3 544 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms