RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 THUMPD1Q9NXG2 353 aaKnown RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 PRO0461Q9UI25 63 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 MYOM1P52179 1685 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 RPAP1Q9BWH6 1393 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-211ENST00000476215 PCNTO95613 3336 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 LTBP1Q14766 1721 aa3.22□□□□□ -1.89
PTCD3-211ENST00000476215 NSG1A0A0A6YYJ2 146 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 IQANK1A0A1B0GTG1 560 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 TCRBV9S1A1TA0A576 114 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 A6NDX4 124 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 A8MXQ7 604 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 AGPAT2O15120 278 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 MED7O43513 233 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 MTX2O75431 263 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 TNFSF13O75888 250 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 OXSR1O95747 527 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-211ENST00000476215 CHTF8P0CG12 524 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 ICAM2P13598 275 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 GLP1RP43220 463 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 RPS10P46783 165 aaKnown RBP3.21□□□□□ -1.9
PTCD3-211ENST00000476215 QARSP47897 775 aaKnown RBP3.21□□□□□ -1.9
PTCD3-211ENST00000476215 MECOMQ03112 1051 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 FGL1Q08830 312 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 KLRB1Q12918 225 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 BOLA3Q53S33 107 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 MARCH8Q5T0T0 291 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 CYB5R2Q6BCY4 276 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 MFSD6LQ8IWD5 586 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 Q8N9W7 124 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 IPMKQ8NFU5 416 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 BLOC1S5Q8TDH9 187 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 UBE2E3Q969T4 207 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 TRIM44Q96DX7 344 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-211ENST00000476215 RBM14Q96PK6 669 aaKnown RBP3.21□□□□□ -1.9
PTCD3-211ENST00000476215 CLCC1Q96S66 551 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 ROGDIQ9GZN7 287 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 RNF167Q9H6Y7 350 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 C6orf203Q9P0P8 240 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-211ENST00000476215 SEC14L3Q9UDX4 400 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 TMCO1Q9UM00 188 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 LY75O60449 1722 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 SHANK3Q9BYB0 1731 aa3.21□□□□□ -1.9
PTCD3-211ENST00000476215 PHF3Q92576 2039 aaKnown RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 KDM6AO15550 1401 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 COL24A1Q17RW2 1714 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 C15orf38-AP3S2A0A0A6YYH1 394 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 LOC110117498-PIK3R3F6TDL0 507 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 SNNO75324 88 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 HOXC4P09017 264 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 TOP1P11387 765 aaKnown RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 POU2F1P14859 743 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 RCC1P18754 421 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 FMO3P31513 532 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 DDOSTP39656 456 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 GRIA1P42261 906 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 GSSP48637 474 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 ARRB1P49407 418 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 DLX1P56177 255 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 TNFRSF17Q02223 184 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 VGLL4Q14135 290 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 OXA1LQ15070 435 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 ATP6AP1Q15904 470 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 DUSP7Q16829 419 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 EXOC3L2Q2M3D2 409 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 SFT2D3Q587I9 215 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 CARD16Q5EG05 197 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 OR4F3Q6IEY1 312 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 ZSCAN25Q6NSZ9 544 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 C6orf89Q6UWU4 347 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 ACP7Q6ZNF0 438 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 Q6ZPB1 254 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 ENTHD1Q8IYW4 607 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 ARIH2OSQ8N7S6 290 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 MFSD9Q8NBP5 474 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 STEAP2Q8NFT2 490 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 OR52H1Q8NGJ2 320 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 UFD1Q92890 307 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 IL22RA2Q969J5 263 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 TIMD4Q96H15 378 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 SLC38A2Q96QD8 506 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 OR11A1Q9GZK7 315 aa3.2□□□□□ -1.9
PTCD3-211ENST00000476215 PRG3Q9Y2Y8 225 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-211ENST00000476215 USP42Q9H9J4 1324 aaKnown RBP3.19□□□□□ -1.9
PTCD3-211ENST00000476215 C4BP0C0L5 1744 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 QSER1Q2KHR3 1735 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 DOT1LQ8TEK3 1739 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 ITGB4P16144 1822 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 KIF20BQ96Q89 1820 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 TRBV6-6A0A0A6YYG2 114 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 KRTAP4-16G5E9R7 235 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-211ENST00000476215 RTL8CO15255 209 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PRKAB2O43741 272 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 RAMP3O60896 148 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 MOSP00540 346 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 MMP1P03956 469 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 DBTP11182 482 aaKnown RBP3.19□□□□□ -1.9
PTCD3-211ENST00000476215 NCK1P16333 377 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 ABOP16442 354 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 CCR1P32246 355 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms