RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RIN1Q13671 783 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 MFSD13AQ14CX5 517 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TRIP10Q15642 601 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 CARTPTQ16568 116 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 KRT80Q6KB66 452 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 C5orf46Q6UWT4 87 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 SPATA21Q7Z572 469 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 LRP11Q86VZ4 500 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 CARM1Q86X55 608 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 KRT73Q86Y46 540 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 ARMC8Q8IUR7 673 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF584Q8IVC4 421 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 UEVLDQ8IX04 471 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 SKA3Q8IX90 412 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF786Q8N393 782 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 GPR137CQ8N3F9 429 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 DPP10Q8N608 796 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 HIPK4Q8NE63 616 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 PIK3C3Q8NEB9 887 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 LRRC8CQ8TDW0 803 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TMEM158Q8WZ71 300 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TMEM54Q969K7 222 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TAMM41Q96BW9 452 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 ATP6V1G3Q96LB4 118 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 ANKRD27Q96NW4 1050 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 PIMREGQ9BSJ6 248 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TMEM43Q9BTV4 400 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF426Q9BUY5 554 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 SPATA5L1Q9BVQ7 753 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 MRPL37Q9BZE1 423 aaKnown RBP6.05□□□□□ -1.44
HDAC3-207ENST00000475549 SHARPINQ9H0F6 387 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 KAT8Q9H7Z6 458 aaKnown RBP6.05□□□□□ -1.44
HDAC3-207ENST00000475549 CHODLQ9H9P2 273 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 CACYBPQ9HB71 228 aaKnown RBP6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TMEM27Q9HBJ8 222 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 MYEF2Q9P2K5 600 aaKnown RBP6.05□□□□□ -1.44
HDAC3-207ENST00000475549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-207ENST00000475549 TESQ9UGI8 421 aaKnown RBP6.05□□□□□ -1.44
HDAC3-207ENST00000475549 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 NBEAL1Q6ZS30 2694 aa6.05□□□□□ -1.44
HDAC3-207ENST00000475549 PRORSD1PA6NEY8 169 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FBP2O00757 339 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 WNT9BO14905 357 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FMO6PO60774 539 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 SERPINB7O75635 380 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 SERPINI2O75830 405 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 CH25HO95992 272 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 C8BP07358 591 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 TACSTD2P09758 323 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 CD79AP11912 226 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 APEHP13798 732 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 IFNGR1P15260 489 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 NQO1P15559 274 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 TCN1P20061 433 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FUT4P22083 530 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 PPIBP23284 216 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 GTF2E2P29084 291 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 THBS2P35442 1172 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 CAPZA2P47755 286 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 GZMKP49863 264 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 BIDP55957 195 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 STX1BP61266 288 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 RAB1AP62820 205 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 IL1RL1Q01638 556 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 RUNX1T1Q06455 604 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 PUDPQ08623 228 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 SNTB2Q13425 540 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 DAG1Q14118 895 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 SQLEQ14534 574 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF74Q16587 644 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FXNQ16595 210 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 GSG1Q2KHT4 349 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 IQCCQ4KMZ1 466 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 ENTPD8Q5MY95 495 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 ELFN2Q5R3F8 820 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FAM166AQ6J272 317 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF613Q6PF04 617 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF813Q6ZN06 617 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 CCDC36Q8IYA8 594 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 PAQR4Q8N4S7 273 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 C10orf53Q8N6V4 93 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 IL17RDQ8NFM7 739 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 RNF217Q8TC41 542 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 CKAP2Q8WWK9 683 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 MRPL24Q96A35 216 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 C1orf159Q96HA4 380 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF607Q96SK3 696 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 EPYCQ99645 322 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 CGREF1Q99674 301 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 MCHR1Q99705 422 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FOXB1Q99853 325 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 KCNS3Q9BQ31 491 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 PRSS27Q9BQR3 290 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 RAB1BQ9H0U4 201 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 TPK1Q9H3S4 243 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 MOV10Q9HCE1 1003 aaKnown RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 MYOZ1Q9NP98 299 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 MEPEQ9NQ76 525 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-207ENST00000475549 USP22Q9UPT9 525 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms