RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CMTM5Q96DZ9 223 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NUS1Q96E22 293 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC126Q96EE4 140 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 C11orf24Q96F05 449 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PDXPQ96GD0 296 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 AURKBQ96GD4 344 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DCUN1D1Q96GG9 259 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 COX14Q96I36 57 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FAM218AQ96MZ4 157 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF641Q96N77 438 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MS4A10Q96PG2 267 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 VPS35Q96QK1 796 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OR4K3Q96R72 315 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 COPS8Q99627 209 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF184Q99676 751 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 P2RY13Q9BPV8 354 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 C19orf43Q9BQ61 176 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 INPP5KQ9BT40 448 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ZSCAN5AQ9BUG6 496 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RBM24Q9BX46 236 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SPATA16Q9BXB7 569 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 NUSAP1Q9BXS6 441 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 EBPLQ9BY08 206 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF717Q9BY31 904 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MRPL1Q9BYD6 325 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC2A11Q9BYW1 496 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ACPTQ9BZG2 426 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM4Q9C037 500 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 AICDAQ9GZX7 198 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OR52A5Q9H2C5 316 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM245Q9H330 911 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PRO3102Q9H379 93 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RPF2Q9H7B2 306 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MTHFD2LQ9H903 347 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 IL1RL2Q9HB29 575 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 TRPV4Q9HBA0 871 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RDH14Q9HBH5 336 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 EML4Q9HC35 981 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SYTL2Q9HCH5 934 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MYNNQ9NPC7 610 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 MRPL40Q9NQ50 206 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 EQTNQ9NQ60 294 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 LHX9Q9NQ69 397 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PRSS16Q9NQE7 514 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 HEBP1Q9NRV9 189 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CMTM6Q9NX76 183 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 VNN3Q9NY84 501 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC25A37Q9NYZ2 338 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PKD2L2Q9NZM6 624 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CD274Q9NZQ7 290 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC167Q9P0B6 97 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 STOX2Q9P2F5 926 aaPredicted RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 STX18Q9P2W9 335 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 ATXN10Q9UBB4 475 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 OPTCQ9UBM4 332 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLC23A2Q9UGH3 650 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CD300AQ9UGN4 299 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PTBP2Q9UKA9 531 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 APPL1Q9UKG1 709 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 RNF150Q9ULK6 438 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PRPF19Q9UMS4 504 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PSMD13Q9UNM6 376 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PPIEQ9UNP9 301 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PDE10AQ9Y233 779 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CA5BQ9Y2D0 317 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 PADI2Q9Y2J8 665 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FADS3Q9Y5Q0 445 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 SLCO1B1Q9Y6L6 691 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 V9GYQ6 96 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DNHD1Q96M86 4753 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH9Q9NYC9 4486 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CACNA1DQ01668 2161 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CHD6Q8TD26 2715 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 CUBNO60494 3623 aa1.21□□□□□ -2.22
CCDC39-203ENST00000473854 FBN1P35555 2871 aaKnown RBP1.21□□□□□ -2.22
CCDC39-203ENST00000473854 WNK2Q9Y3S1 2297 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ABCA12Q86UK0 2595 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NAV3Q8IVL0 2385 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TLN2Q9Y4G6 2542 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PTPN13Q12923 2485 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 A0A096LPI6 279 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C15orf38-AP3S2A0A0A6YYH1 394 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 IGKV1-8A0A0C4DH67 115 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 EDDM13A0A1B0GTR0 161 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PPQ1 181 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PQ67 120 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TCRBV21S2A2A0A5A6 115 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DHRS12A0PJE2 317 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FAM149AA5PLN7 773 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 IGLON5A6NGN9 336 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TRPC5OSA6NMA1 111 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR52A4PA6NMU1 304 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 BBIP1A8MTZ0 92 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C2CD4DB7Z1M9 353 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANHXE9PGG2 379 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMX2-CTNND1H3BSU7 103 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GFYI3L273 518 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PDLIM1O00151 329 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 UPK1AO00322 258 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms