RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CEBPGP53567 150 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CRISP1P54107 249 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SELENOTP62341 195 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 FKBP1BP68106 108 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CTBP1Q13363 440 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 QRICH1Q2TAL8 776 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 KIAA0930Q6ICG6 404 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TSSK4Q6SA08 328 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TMIGD1Q6UXZ0 262 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 HEPN1Q6WQI6 88 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC39A5Q6ZMH5 540 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC24A5Q71RS6 500 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 GOLGA7Q7Z5G4 137 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 LGI4Q8N135 537 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 BMPERQ8N8U9 685 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2D3Q8NGH3 330 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR4C15Q8NGM1 316 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 HPSE2Q8WWQ2 592 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 THRSPQ92748 146 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CMBLQ96DG6 245 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SAT2Q96F10 170 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 PACRGQ96M98 296 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 C1QTNF3Q9BXJ4 246 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 GLIS2Q9BZE0 524 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CSTL1Q9H114 145 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10A4Q9H209 315 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM185BQ9H7F4 350 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZMAT3Q9HA38 289 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 KLHL8Q9P2G9 620 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 A4GNTQ9UNA3 340 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CAMK2AQ9UQM7 478 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SLCO1B1Q9Y6L6 691 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 FNDC1Q4ZHG4 1894 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 C7orf77A4D0Y5 90 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TLR4O00206 839 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 MAGEB4O15481 346 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CA11O75493 328 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 GCGP01275 180 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 RLN1P04808 185 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CD5P06127 495 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 IGFBP1P08833 259 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CTXN2P0C2S0 81 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 HOXA11P31270 313 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CNR2P34972 360 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CHI3L1P36222 383 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 IFNGR2P38484 337 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TAF6P49848 677 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 RABGGTBP53611 331 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 H2BFSP57053 126 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 NAAAQ02083 359 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ATP6V1FQ16864 119 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC25A30Q5SVS4 291 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZDHHC20Q5W0Z9 365 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OLFML2AQ68BL7 652 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 NCR3LG1Q68D85 454 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF774Q6NX45 483 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF529Q6P280 563 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 KLHL24Q6TFL4 600 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF620Q6ZNG0 422 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 VRK2Q86Y07 508 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 CACUL1Q86Y37 369 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEFF1Q8IYR6 380 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 JAGN1Q8N5M9 183 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 LILRA3Q8N6C8 439 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2AK2Q8NG84 335 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR4F15Q8NGB8 312 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR4K2Q8NGD2 314 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR8J1Q8NGP2 316 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10Q1Q8NGQ4 319 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR1J1Q8NGS3 322 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF480Q8WV37 535 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 NUDCD2Q8WVJ2 157 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC41A3Q96GZ6 507 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 PDCD2LQ9BRP1 358 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TSSK6Q9BXA6 273 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 RERGLQ9H628 205 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 KIR3DX1Q9H7L2 352 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 RHOFQ9HBH0 211 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SERINC1Q9NRX5 453 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 LRFN1Q9P244 771 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 YARS2Q9Y2Z4 477 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 EXOSC1Q9Y3B2 195 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM96BQ9Y3D0 163 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 GBF1Q92538 1859 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 C20orf202A1L168 122 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GABRPO00591 440 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NPC1O15118 1278 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 KCNAB3O43448 404 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NCR1O76036 304 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DFFBO76075 338 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 VNN2O95498 520 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CD19P15391 556 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NT5EP21589 574 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TEAD1P28347 426 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GYG1P46976 350 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC11A2P49281 568 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF84P51523 738 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTBP60709 375 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTA2P62736 377 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms