RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 STK35Q8TDR2 534 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 SNX33Q8WV41 574 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 PSMF1Q92530 271 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 NXPE2Q96DL1 559 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 PELI1Q96FA3 418 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 AMELYQ99218 206 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 PDCD1LG2Q9BQ51 273 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 ZPBPQ9BS86 351 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 JAM3Q9BX67 310 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 HAO2Q9NYQ3 351 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 ZNF407Q9C0G0 2248 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 IGHV3-15A0A0B4J1V0 119 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 IGKV1D-43A0A0B4J1Z2 117 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 LIPT2A6NK58 231 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 XKRYO14609 159 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 IDH3BO43837 385 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SLC16A7O60669 478 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 DXOO77932 396 aaKnown RBP5.59□□□□□ -1.51
CLK1-210ENST00000473565 TXNDC12O95881 172 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 HLA-DQA2P01906 255 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 RFPL3SP0C7P2 107 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 DPP4P27487 766 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SUMO3P55854 103 aaPredicted RBP5.59□□□□□ -1.51
CLK1-210ENST00000473565 TUBA1BP68363 451 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 PUDPQ08623 228 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SSPNQ14714 243 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 RAET1LQ5VY80 246 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 TUBA1AQ71U36 451 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SLC35D2Q76EJ3 337 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SYT9Q86SS6 491 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 PIP4P1Q86T03 277 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 GPAT4Q86UL3 456 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 PLCZ1Q86YW0 608 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 FADS6Q8N9I5 356 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 OR6N2Q8NGY6 317 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 ZNF519Q8TB69 540 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 DDIT4LQ96D03 193 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 HES7Q9BYE0 225 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 TRIM36Q9NQ86 728 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SDHAF3Q9NRP4 125 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 MRPL39Q9NYK5 338 aaKnown RBP5.59□□□□□ -1.51
CLK1-210ENST00000473565 DNAJC13O75165 2243 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 DMXL2Q8TDJ6 3036 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 IGLV3-32A0A0A0MS00 114 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 RGS5O15539 181 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 OR2T1O43869 369 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 WNT11O96014 354 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 RENP00797 406 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 OR2T7P0C7T2 308 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
CLK1-210ENST00000473565 OR2B6P58173 313 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 GABREP78334 506 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 GGTLC2Q14390 218 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 ODF4Q2M2E3 257 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 ACER2Q5QJU3 275 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 ARMC4Q5T2S8 1044 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 LCN1P1Q5VSP4 162 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 SPINK14Q6IE38 97 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 LINC00696Q6ZRV3 163 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 YRDCQ86U90 279 aaKnown RBP5.59□□□□□ -1.51
CLK1-210ENST00000473565 VASH2Q86V25 355 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 ZNF227Q86WZ6 799 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 IL22RA1Q8N6P7 574 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 POMGNT2Q8NAT1 580 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 OR2T27Q8NH04 317 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 PAQR8Q8TEZ7 354 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 GHSRQ92847 366 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 BORCS5Q969J3 196 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 MRGPRX4Q96LA9 322 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 KCTD7Q96MP8 289 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 TXNIPQ9H3M7 391 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 POLE4Q9NR33 117 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 DEPPQ9NTK1 212 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 PLA2G3Q9NZ20 509 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 KCNG2Q9UJ96 466 aa5.59□□□□□ -1.51
CLK1-210ENST00000473565 DSPP15924 2871 aaKnown RBP5.59□□□□□ -1.51
CLK1-210ENST00000473565 PRSS37A4D1T9 235 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 PINLYPA6NC86 204 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 PRR33A8MZF0 331 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 TERTO14746 1132 aaKnown RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 CASKO14936 926 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 TRIM3O75382 744 aaPredicted RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 HPP00738 406 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 IGHEP01854 428 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 RAB40ALP0C0E4 278 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 LIFP15018 202 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 MSX1P28360 303 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 SLC25A1P53007 311 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 NANOS3P60323 173 aaKnown RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 TMED1Q13445 227 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 EEF1A1P5Q5VTE0 462 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 CARD17Q5XLA6 110 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 GPR139Q6DWJ6 353 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 H1FNTQ75WM6 255 aaPredicted RBP5.59□□□□□ -1.52
CLK1-210ENST00000473565 NR2C2APQ86WQ0 139 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 LAX1Q8IWV1 398 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 TIGD4Q8IY51 512 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 OR1J4Q8NGS1 313 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 MFSD8Q8NHS3 518 aa5.59□□□□□ -1.52
CLK1-210ENST00000473565 NEIL3Q8TAT5 605 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms