RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 M0R3G1 203 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 PLPP3O14495 311 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 CHP2O43745 196 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 TPST1O60507 370 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 MFN2O95140 757 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 UBL3O95164 117 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 IGFBP1P08833 259 aaPredicted RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 CELA3BP08861 270 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 IDH3AP50213 366 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 DVL1P1P54792 670 aaPredicted RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 CDH15P55291 814 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 TMEM33P57088 247 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 PCBP3P57721 371 aaKnown RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 RGS8P57771 180 aaPredicted RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 PMS2P3Q13401 168 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 SNTB2Q13425 540 aaKnown RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 FXNQ16595 210 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 TRMT5Q32P41 509 aaKnown RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 ZNF813Q6ZN06 617 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 DEF8Q6ZN54 512 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 SVOPLQ8N434 492 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 DPP10Q8N608 796 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 ARIH2OSQ8N7S6 290 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 C11orf65Q8NCR3 313 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 OR5J2Q8NH18 312 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 FOXB1Q99853 325 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 C1orf198Q9H425 327 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 ZNF385DQ9H6B1 395 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 CHODLQ9H9P2 273 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 SEC61A2Q9H9S3 476 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 DYNLRB1Q9NP97 96 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 CCDC167Q9P0B6 97 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 TMEFF2Q9UIK5 374 aaPredicted RBP11.68□□□□□ -0.54
CHD3-209ENST00000473376 ANGPT4Q9Y264 503 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
CHD3-209ENST00000473376 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 CENPBD1B2RD01 187 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 B4DSR2 109 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 M0R233 179 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 HPRP00739 348 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 IGF2P01344 180 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 SERPINA5P05154 406 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 LSP1P33241 339 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 CDH12P55289 794 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 NPRL3Q12980 569 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 SCGB2A2Q13296 93 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 CARTPTQ16568 116 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 CR1LQ2VPA4 569 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 PAGE3Q5JUK9 113 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 PHYHD1Q5SRE7 291 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
CHD3-209ENST00000473376 AGBL2Q5U5Z8 902 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 DLEU7Q6UYE1 221 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 MYPOPQ86VE0 399 aaPredicted RBP11.67□□□□□ -0.54
CHD3-209ENST00000473376 COMTD1Q86VU5 262 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 ZFAND2BQ8WV99 257 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 RASSF5Q8WWW0 418 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 MPP4Q96JB8 637 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 ULBP2Q9BZM5 246 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 RACGAP1Q9H0H5 632 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 PCDHAC1Q9H158 963 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 SLCO1B3Q9NPD5 702 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 SLAMF8Q9P0V8 285 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 REV1Q9UBZ9 1251 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 SLC7A8Q9UHI5 535 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 GPR160Q9UJ42 338 aa11.67□□□□□ -0.54
CHD3-209ENST00000473376 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
CHD3-209ENST00000473376 TPST2O60704 377 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 RAB36O95755 333 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 PTHP01270 115 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 HLA-HP01893 362 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 ADRA2AP08913 450 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 CD79AP11912 226 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 HLA-DOBP13765 273 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 IFNGR1P15260 489 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 ACHEP22303 614 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 APEX1P27695 318 aaKnown RBP11.66□□□□□ -0.54
CHD3-209ENST00000473376 CAPZA2P47755 286 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 RAB1AP62820 205 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 GALK2Q01415 458 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 IL1RL1Q01638 556 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 GLIPR1L2Q4G1C9 344 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 RUNDC3AQ59EK9 446 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 CDK20Q8IZL9 346 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 OR6N1Q8NGY5 312 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 LRRC8CQ8TDW0 803 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 RDH5Q92781 318 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 TMEM54Q969K7 222 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 SLC25A44Q96H78 314 aaPredicted RBP11.66□□□□□ -0.54
CHD3-209ENST00000473376 MOGAT1Q96PD6 335 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 ARHGDIGQ99819 225 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 ZNF224Q9NZL3 707 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 ZNF229Q9UJW7 825 aa11.66□□□□□ -0.54
CHD3-209ENST00000473376 TCF21O43680 179 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 OR6A2O95222 327 aa11.65□□□□□ -0.54
CHD3-209ENST00000473376 SNAP29O95721 258 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms