RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 P2RY6Q15077 328 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 C9orf135Q5VTT2 229 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 NIPAL3Q6P499 406 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 BHLHA15Q7RTS1 189 aaPredicted RBP11.53□□□□□ -0.56
TPM3-216ENST00000473036 ACOT11Q8WXI4 607 aaPredicted RBP11.53□□□□□ -0.56
TPM3-216ENST00000473036 SGTBQ96EQ0 304 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 HS6ST2Q96MM7 605 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 ALPK1Q96QP1 1244 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 OR2M2Q96R28 347 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 PIP5K1AQ99755 562 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 ASPNQ9BXN1 380 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 SLCO5A1Q9H2Y9 848 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 KRCC1Q9NPI7 259 aaPredicted RBP11.53□□□□□ -0.56
TPM3-216ENST00000473036 GPR52Q9Y2T5 361 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 MED31Q9Y3C7 131 aa11.53□□□□□ -0.56
TPM3-216ENST00000473036 ACANP16112 2415 aa11.52□□□□□ -0.56
TPM3-216ENST00000473036 FLNAP21333 2647 aaKnown RBP11.52□□□□□ -0.57
TPM3-216ENST00000473036 A0A1W2PRQ8 180 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 CLOCKO15516 846 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 MGRN1O60291 552 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 H1F0P07305 194 aaKnown RBP11.52□□□□□ -0.57
TPM3-216ENST00000473036 IFI30P13284 250 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 CRYGSP22914 178 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 IFNGR2P38484 337 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 AQP2P41181 271 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 RUNX1T1Q06455 604 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 DGCR6Q14129 220 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 TAB1Q15750 504 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 GABRA6Q16445 453 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 OR2T5Q6IEZ7 315 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 MBOAT2Q6ZWT7 520 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 RRM2BQ7LG56 351 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 PXKQ7Z7A4 578 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 UEVLDQ8IX04 471 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 UBE2J2Q8N2K1 259 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 LRRC75AQ8NAA5 344 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 OR2T29Q8NH02 315 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 OR52J3Q8NH60 311 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 KISS1RQ969F8 398 aaPredicted RBP11.52□□□□□ -0.57
TPM3-216ENST00000473036 MBD6Q96DN6 1003 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 BPIFA2Q96DR5 249 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 NRBF2Q96F24 287 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 CENPNQ96H22 339 aaPredicted RBP11.52□□□□□ -0.57
TPM3-216ENST00000473036 MED18Q9BUE0 208 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 NELFAQ9H3P2 528 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 REEP1Q9H902 201 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 C8orf4Q9NR00 106 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 RASSF1Q9NS23 344 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 PARPBPQ9NWS1 579 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 ASB6Q9NWX5 421 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 VNN3Q9NY84 501 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 NPAP1Q9NZP6 1156 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 STX18Q9P2W9 335 aaKnown RBP11.52□□□□□ -0.57
TPM3-216ENST00000473036 TMCC3Q9ULS5 477 aa11.52□□□□□ -0.57
TPM3-216ENST00000473036 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
TPM3-216ENST00000473036 NSD1Q96L73 2696 aaPredicted RBP11.51□□□□□ -0.57
TPM3-216ENST00000473036 A0A1W2PR80 420 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 BLOC1S5-TXNDC5H3BN57 136 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 RAD51DO75771 328 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 SERPINI2O75830 405 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 F13BP05160 661 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 IFNGR1P15260 489 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 AHCYP23526 432 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 RRM2P31350 389 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 GPR4P46093 362 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 OMPP47874 163 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 LIMS1P48059 325 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 HMGA2P52926 109 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 FXYD6P3P58550 94 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 RPS4XP62701 263 aaKnown RBP11.51□□□□□ -0.57
TPM3-216ENST00000473036 CAMK2DQ13557 499 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 C1DQ13901 141 aaKnown RBP11.51□□□□□ -0.57
TPM3-216ENST00000473036 MELKQ14680 651 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 ATP6AP1Q15904 470 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 RNF113BQ8IZP6 322 aaKnown RBP11.51□□□□□ -0.57
TPM3-216ENST00000473036 WDR31Q8NA23 367 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 PYDC1Q8WXC3 89 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 MUS81Q96NY9 551 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 ALKBH3Q96Q83 286 aaPredicted RBP11.51□□□□□ -0.57
TPM3-216ENST00000473036 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 HDHD5Q9BXW7 423 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 OR10A4Q9H209 315 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 VCX3BQ9H321 246 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 LIME1Q9H400 295 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 DLL4Q9NR61 685 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 NDRG3Q9UGV2 375 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 RCE1Q9Y256 329 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 HIF3AQ9Y2N7 669 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 NOX1Q9Y5S8 564 aa11.51□□□□□ -0.57
TPM3-216ENST00000473036 TRAV27A0A087WT01 109 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 SH3PXD2BA1X283 911 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 GADD45GO95257 159 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 BAG2O95816 211 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 PLAUP00749 431 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 IL32P24001 234 aa11.5□□□□□ -0.57
TPM3-216ENST00000473036 IL1RL1Q01638 556 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms