RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 IGHV4-31P0DP07 118 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 AHCYP23526 432 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 THBS4P35443 961 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 NR4A2P43354 598 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 PPOXP50336 477 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 GZMMP51124 257 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 ENTPD8Q5MY95 495 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 PATL1Q86TB9 770 aaKnown RBP13.24□□□□□ -0.29
VTI1A-203ENST00000472892 SLC30A8Q8IWU4 369 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 C10orf53Q8N6V4 93 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 ANKS4BQ8N8V4 417 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 OR5J2Q8NH18 312 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 FOXN4Q96NZ1 517 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 SIKE1Q9BRV8 207 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 YLPM1P49750 1951 aaKnown RBP13.23□□□□□ -0.29
VTI1A-203ENST00000472892 TMEM129A0AVI4 362 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 SEC14L2O76054 403 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 HLA-HP01893 362 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 OPN1SWP03999 348 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 NPR2P20594 1047 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 CD247P20963 164 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 PCGF2P35227 344 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 CAPZA2P47755 286 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 ZP4Q12836 540 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 NPRL3Q12980 569 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 CAMK2DQ13557 499 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 NFYCQ13952 458 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 WDR88Q6ZMY6 472 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 SNX32Q86XE0 403 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 RBM45Q8IUH3 476 aaKnown RBP13.23□□□□□ -0.29
VTI1A-203ENST00000472892 OR4D11Q8NGI4 311 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 ADAMTS16Q8TE57 1224 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 TAMM41Q96BW9 452 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF75AQ96N20 296 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 PIMREGQ9BSJ6 248 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 RAB1BQ9H0U4 201 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 PCDHAC1Q9H158 963 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 NPHS2Q9NP85 383 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 B3GAT2Q9NPZ5 323 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 TAS2R5Q9NYW4 299 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 CDC42EP3Q9UKI2 254 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 POFUT2Q9Y2G5 429 aa13.23□□□□□ -0.29
VTI1A-203ENST00000472892 A0A0G2JND7 137 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
VTI1A-203ENST00000472892 hCG_2039718K7EN88 272 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 FAM157CP0CG43 387 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 ADORA3P0DMS8 318 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 NR4A1P22736 598 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 GZMKP49863 264 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF74Q16587 644 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 GSG1Q2KHT4 349 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF813Q6ZN06 617 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 CCDC80Q76M96 950 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 TSPYL5Q86VY4 417 aaPredicted RBP13.22□□□□□ -0.29
VTI1A-203ENST00000472892 OR6N1Q8NGY5 312 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 OR10A6Q8NH74 314 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 MPP4Q96JB8 637 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 ULBP2Q9BZM5 246 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 DENND2DQ9H6A0 471 aaPredicted RBP13.22□□□□□ -0.29
VTI1A-203ENST00000472892 NOX3Q9HBY0 568 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF224Q9NZL3 707 aa13.22□□□□□ -0.29
VTI1A-203ENST00000472892 TRAPPC13A5PLN9 417 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 FBP2O00757 339 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 OR6A2O95222 327 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 CH25HO95992 272 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 IGFBP1P08833 259 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-203ENST00000472892 CD79AP11912 226 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF35P13682 527 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 IFNGR1P15260 489 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 H2AFXP16104 143 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF14P17017 642 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-203ENST00000472892 CRYBA2P53672 197 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 BIDP55957 195 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 PIGFQ07326 219 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 DAG1Q14118 895 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 VMACQ2NL98 169 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 INTS11Q5TA45 600 aaKnown RBP13.21□□□□□ -0.29
VTI1A-203ENST00000472892 NANOGP8Q6NSW7 305 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 SPATA21Q7Z572 469 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 SVOPLQ8N434 492 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF540Q8NDQ6 660 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 OR6X1Q8NH79 312 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-203ENST00000472892 NEU4Q8WWR8 484 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-203ENST00000472892 TMEM54Q969K7 222 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 FOXB1Q99853 325 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 NANOGQ9H9S0 305 aa13.21□□□□□ -0.29
VTI1A-203ENST00000472892 SVEP1Q4LDE5 3571 aa13.21□□□□□ -0.3
VTI1A-203ENST00000472892 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.3
VTI1A-203ENST00000472892 IGHV4-61A0A0C4DH41 118 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 C11orf98E9PRG8 122 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 LMX1BO60663 402 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 SERPINI2O75830 405 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 STAMBPO95630 424 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 ASAH2BP0C7U1 165 aa13.2□□□□□ -0.3
VTI1A-203ENST00000472892 B4GALT1P15291 398 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms