RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 LRFN5Q96NI6 719 aa13.6□□□□□ -0.23
UBXN11-213ENST00000472155 OR6C1Q96RD1 312 aa13.6□□□□□ -0.23
UBXN11-213ENST00000472155 PCED1AQ9H1Q7 454 aa13.6□□□□□ -0.23
UBXN11-213ENST00000472155 ABCG5Q9H222 651 aa13.6□□□□□ -0.23
UBXN11-213ENST00000472155 MRPL15Q9P015 296 aaKnown RBP13.6□□□□□ -0.23
UBXN11-213ENST00000472155 U3KQA8 63 aa13.6□□□□□ -0.23
UBXN11-213ENST00000472155 TRAV1-2A0A0B4J238 106 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 SUSD5O60279 629 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 DOK2O60496 412 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 PDGFBP01127 241 aaPredicted RBP13.59□□□□□ -0.23
UBXN11-213ENST00000472155 PRKCAP17252 672 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 DHPSP49366 369 aaPredicted RBP13.59□□□□□ -0.23
UBXN11-213ENST00000472155 ISXQ2M1V0 245 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 PWWP2BQ6NUJ5 590 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 SLC16A9Q7RTY1 509 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 THEM6Q8WUY1 208 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 RNF170Q96K19 258 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 IKZF2Q9UKS7 526 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 TRAV6A0A075B6T7 132 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 H0YC42 278 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 SLC43A1O75387 559 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 ANKRD34CP0C6C1 535 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 ADRA2CP18825 462 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 RBMS1P29558 406 aaKnown RBP13.59□□□□□ -0.23
UBXN11-213ENST00000472155 CLDN20P56880 219 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 RNF4P78317 190 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 ACKR1Q16570 336 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 UNQ9370/PRO34162Q6UXP9 181 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 PRR23CQ6ZRP0 262 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 MDGA2Q7Z553 956 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 CDC20BQ86Y33 519 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 KCTD12Q96CX2 325 aaKnown RBP13.59□□□□□ -0.23
UBXN11-213ENST00000472155 SLC7A5P2Q9GIP4 190 aa13.59□□□□□ -0.23
UBXN11-213ENST00000472155 ZNF768Q9H5H4 540 aaKnown RBP13.59□□□□□ -0.23
UBXN11-213ENST00000472155 TMED7-TICAM2A0A0A6YYA0 188 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 ZNF879B4DU55 563 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 MPZL1O95297 269 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 TXNDC12O95881 172 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 HIST1H2ABP04908 130 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 CENPAP49450 140 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 SLC25A1P53007 311 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 GPLD1P80108 840 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 INPP5JQ15735 1006 aaPredicted RBP13.58□□□□□ -0.24
UBXN11-213ENST00000472155 HIST3H2AQ7L7L0 130 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 PRSS42Q7Z5A4 293 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 CMTM4Q8IZR5 234 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 RPS4Y2Q8TD47 263 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 HIST1H2ACQ93077 130 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 YIPF5Q969M3 257 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 ZC3HAV1LQ96H79 300 aaKnown RBP13.58□□□□□ -0.24
UBXN11-213ENST00000472155 ARL5BQ96KC2 179 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 SLCO1C1Q9NYB5 712 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 ZNF281Q9Y2X9 895 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 TMED7Q9Y3B3 224 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 NPFFR2Q9Y5X5 522 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 RTTNQ86VV8 2226 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 TO15178 435 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 OPN1LWP04000 364 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 CCL7P80098 99 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 BIKQ13323 160 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 IL10RAQ13651 578 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 COL28A1Q2UY09 1125 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 SLC6A19Q695T7 634 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 MZT2BQ6NZ67 158 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 WDR74Q6RFH5 385 aaPredicted RBP13.58□□□□□ -0.24
UBXN11-213ENST00000472155 ARSKQ6UWY0 536 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 LRRN1Q6UXK5 716 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 CLDN23Q96B33 292 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 MARVELD1Q9BSK0 173 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 PAQR5Q9NXK6 330 aaPredicted RBP13.58□□□□□ -0.24
UBXN11-213ENST00000472155 LAMP5Q9UJQ1 280 aa13.58□□□□□ -0.24
UBXN11-213ENST00000472155 MRTO4Q9UKD2 239 aaKnown RBP13.58□□□□□ -0.24
UBXN11-213ENST00000472155 TRAV8-7A0A075B6U6 113 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 SERPINA3P01011 423 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 SYPP08247 313 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 GP1BBP13224 206 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 PTBP1P26599 531 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBXN11-213ENST00000472155 SLC6A1P30531 599 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 CCR6P51684 374 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 FOXK1P85037 733 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 INSM1Q01101 510 aaPredicted RBP13.57□□□□□ -0.24
UBXN11-213ENST00000472155 PLA1AQ53H76 456 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 EEF1A1P5Q5VTE0 462 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 TMEM53Q6P2H8 277 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 SIAH3Q8IW03 269 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 PRSS35Q8N3Z0 413 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 SLC25A38Q96DW6 304 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 ZCCHC4Q9H5U6 513 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 VDAC3Q9Y277 283 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 PCDHGA9Q9Y5G4 932 aaKnown RBP13.57□□□□□ -0.24
UBXN11-213ENST00000472155 RALGAPA1Q6GYQ0 2036 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 TRAV36DV7A0A075B6V5 113 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 TMEM200CA6NKL6 621 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 NPIPB7O75200 414 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
UBXN11-213ENST00000472155 ARSBP15848 533 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms