RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 IDH3BO43837 385 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 EDNRAP25101 427 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 SELENOPP49908 381 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 DAP3P51398 398 aaKnown RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 CDC42P60953 191 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 EFNB1P98172 346 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 RNPS1Q15287 305 aaKnown RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 CARD17Q5XLA6 110 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 GPR139Q6DWJ6 353 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 NCCRP1Q6ZVX7 275 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 NUFIP2Q7Z417 695 aaKnown RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 ENTHD1Q8IYW4 607 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 HDAC2Q92769 488 aaKnown RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 INTS12Q96CB8 462 aaKnown RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 TP63Q9H3D4 680 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 MED20Q9H944 212 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 BCO1Q9HAY6 547 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 CMC2Q9NRP2 79 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 RASSF1Q9NS23 344 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 LRRC42Q9Y546 428 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 PCDHGB5Q9Y5G0 923 aa17.04■□□□□ 0.32
PSPC1-203ENST00000471658 KMT2BQ9UMN6 2715 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-203ENST00000471658 FAM183AA6NL82 134 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 TRMUO75648 421 aaKnown RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 YES1P07947 543 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 FCGR2AP12318 317 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 PTGER4P35408 488 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 PCYT1AP49585 367 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 IL5RAQ01344 420 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 FOXF2Q12947 444 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 CRMP1Q14194 572 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 IGFBP7Q16270 282 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 GTF2IRD2BQ6EKJ0 949 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 NIPAL3Q6P499 406 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 GTF2IRD2Q86UP8 949 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 SYT14Q8NB59 555 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 SLC37A3Q8NCC5 494 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 NPEPL1Q8NDH3 523 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 CNBD2Q96M20 576 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 SLC38A2Q96QD8 506 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 OR2M2Q96R28 347 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 DDOQ99489 341 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 FN3KQ9H479 309 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 RALYQ9UKM9 306 aaKnown RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 OSGIN2Q9Y236 505 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 MBD3L4A6NDZ8 208 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 MBD3L3A6NE82 208 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 MBD3L5A6NJ08 208 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 NPIPB13A6NJU9 1138 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 NPIPB4C9JG80 1138 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 ZNF432O94892 652 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 ACADSP16219 412 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 LGALS3BPQ08380 585 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 SF3B4Q15427 424 aaKnown RBP eCLIP17.03■□□□□ 0.323e-12■■■■■ 40.8
PSPC1-203ENST00000471658 SOWAHCQ53LP3 525 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 LEG1Q6P5S2 330 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 B3GNT6Q6ZMB0 384 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 MARVELD2Q8N4S9 558 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 OR6X1Q8NH79 312 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 MBD3L2Q8NHZ7 208 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 OTULINQ96BN8 352 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 HCAR1Q9BXC0 346 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 TEX12Q9BXU0 123 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 ANKRD60Q9BZ19 345 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 IMPAD1Q9NX62 359 aa17.03■□□□□ 0.32
PSPC1-203ENST00000471658 NOSIPQ9Y314 301 aaKnown RBP17.03■□□□□ 0.32
PSPC1-203ENST00000471658 TRGV8A0A0C4DH27 118 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 OR6C68A6NDL8 312 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF726A6NNF4 738 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF724A8MTY0 619 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 GPR171O14626 319 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 C1QL1O75973 258 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 HOXD4P09016 255 aaPredicted RBP17.02■□□□□ 0.31
PSPC1-203ENST00000471658 GLI4P10075 376 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 AGTR1P30556 359 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 ISL1P61371 349 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 SIRPAP78324 504 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 TLE1Q04724 770 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 CD47Q08722 323 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 ITGADQ13349 1161 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 AAED1Q7RTV5 226 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 JAZF1Q86VZ6 243 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 CPOQ8IVL8 374 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 C8orf59Q8N0T1 100 aaPredicted RBP17.02■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF843Q8N446 348 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 NAXEQ8NCW5 288 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 RHOXF1Q8NHV9 184 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 PTP4A1Q93096 173 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 SLC25A44Q96H78 314 aaPredicted RBP17.02■□□□□ 0.31
PSPC1-203ENST00000471658 PLEKHA8Q96JA3 519 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 TSSK2Q96PF2 358 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 APOL4Q9BPW4 351 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 TTYH2Q9BSA4 534 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 HINT3Q9NQE9 182 aaKnown RBP17.02■□□□□ 0.31
PSPC1-203ENST00000471658 KLHL21Q9UJP4 597 aa17.02■□□□□ 0.31
PSPC1-203ENST00000471658 MED12LQ86YW9 2145 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 RIIAD1A6NNX1 92 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 XKRYO14609 159 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms