RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 NRAPQ86VF7 1730 aa6.41□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF716A6NP11 495 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 DDAH2O95865 285 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 LAMP1P11279 417 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ARNTP27540 789 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 RGNQ15493 299 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 LTB4RQ15722 352 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF141Q15928 474 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM176BQ3YBM2 270 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 MEPCEQ7L2J0 689 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM139Q8IV31 216 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 UCN3Q969E3 161 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 RPUSD4Q96CM3 377 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 POFUT1Q9H488 388 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 TNFRSF19Q9NS68 423 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 FBXO34Q9NWN3 711 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 NOCTQ9UK39 431 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 P2RY10O00398 339 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 COCHO43405 550 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 COX7A2P2O60397 106 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF217O75362 1048 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ABHD16AO95870 558 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 PIPP12273 146 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 HNRNPH3P31942 346 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 AHRP35869 848 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 NPY4RP50391 375 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 RPS16P62249 146 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ERV3-1Q14264 604 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 OXA1LQ15070 435 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 FAM162BQ5T6X4 162 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 OR10Z1Q8NGY1 313 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ASB17Q8WXJ9 295 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 TRIB3Q96RU7 358 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 UTP23Q9BRU9 249 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM208Q9BTX3 173 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 NOX4Q9NPH5 578 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 CBLCQ9ULV8 474 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 PDGFAP04085 211 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 SLC35E2BP0CK96 405 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 SNRPBP14678 240 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 DNAJB1P25685 340 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 PRAMEF20Q5VT98 475 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 PODNL1Q6PEZ8 512 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 UNC5DQ6UXZ4 953 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 LIPIQ6XZB0 460 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 LINC00696Q6ZRV3 163 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 COMMD1Q8N668 190 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 CDRT4Q8N9R6 151 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 DRAXINQ8NBI3 349 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 OR10J5Q8NHC4 309 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 HAVCR2Q8TDQ0 301 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ADAMTS14Q8WXS8 1223 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 MOB3AQ96BX8 217 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 SFXN1Q9H9B4 322 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 SIX2Q9NPC8 291 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 C1GALT1Q9NS00 363 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 RALYQ9UKM9 306 aaKnown RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 TRAPPC4Q9Y296 219 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF443Q9Y2A4 671 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-210ENST00000471181 SLC35A3Q9Y2D2 325 aa6.4□□□□□ -1.38
BRCA1-210ENST00000471181 H3BQ06 376 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-210ENST00000471181 RNF225M0QZC1 329 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-210ENST00000471181 GPR31O00270 319 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 FOXE1O00358 373 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-210ENST00000471181 DCTN6O00399 190 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 GPR37O15354 613 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.39
BRCA1-210ENST00000471181 RTL8BQ17RB0 113 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 TIGITQ495A1 244 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 MSS51Q4VC12 460 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 LCN15Q6UWW0 184 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 MDGA2Q7Z553 956 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 BHLHE23Q8NDY6 225 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 OR2A1Q8NGT9 310 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 OR2T6Q8NHC8 308 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 DPH3Q96FX2 82 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 C1QTNF6Q9BXI9 259 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 BARHL1Q9BZE3 327 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 EGLN1Q9GZT9 426 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 PELI2Q9HAT8 420 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 LANCL2Q9NS86 450 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 IGHV3-64DA0A0J9YX35 117 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 A0A0J9YY10 115 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM72A0PK05 275 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 FAM183AA6NL82 134 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 FABP7O15540 132 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 TTRP02766 147 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 OR5AL1P0C617 328 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 HTR2CP28335 458 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 RBP2P50120 134 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 CDKN2DP55273 166 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 INPP5JQ15735 1006 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-210ENST00000471181 SCGB1D4Q6XE38 83 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 CAMKMTQ7Z624 323 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 C14orf80Q86SX3 495 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM135Q86UB9 458 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 KCNRGQ8N5I3 272 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 KLHDC1Q8N7A1 406 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 APIPQ96GX9 242 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 PECRQ9BY49 303 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms