RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 GABARAPL2P60520 117 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 RBPJQ06330 500 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 POU4F2Q12837 409 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 MELKQ14680 651 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 POU4F3Q15319 338 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 C19orf48Q6RUI8 117 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 FAM122BQ7Z309 247 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 SIAH3Q8IW03 269 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 CISD2Q8N5K1 135 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 PROKR2Q8NFJ6 384 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 TSPAN14Q8NG11 270 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 OR9K2Q8NGE7 335 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 OR6K6Q8NGW6 343 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 OR6N1Q8NGY5 312 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 OR6X1Q8NH79 312 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 APH1BQ8WW43 257 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 SLC25A44Q96H78 314 aaPredicted RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 WDYHV1Q96HA8 205 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 ZNF845Q96IR2 970 aaPredicted RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 SNX18Q96RF0 628 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 MYCBPQ99417 103 aaPredicted RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 COPS4Q9BT78 406 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 ZNF696Q9H7X3 374 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 B3GAT2Q9NPZ5 323 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 HINT3Q9NQE9 182 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 RPRD1BQ9NQG5 326 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 PLCXD1Q9NUJ7 323 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 PARPBPQ9NWS1 579 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 ASB6Q9NWX5 421 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 MED29Q9NX70 200 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 CNOT2Q9NZN8 540 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 SPRR3Q9UBC9 169 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 TNFRSF10DQ9UBN6 386 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 AASSQ9UDR5 926 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 MOKQ9UQ07 419 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 ZNF175Q9Y473 711 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 PCDHGB1Q9Y5G3 927 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 IGF2RP11717 2491 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 SLC35F4A4IF30 521 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 FIGNL2A6NMB9 653 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 TTLL8A6PVC2 850 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 CENPBD1B2RD01 187 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 KDM4EB2RXH2 506 aaPredicted RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 RGS10O43665 173 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 CYTIPO60759 359 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 MRPS14O60783 128 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 SLC43A1O75387 559 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 KRT33AO76009 404 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 HLA-DQA2P01906 255 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 GABRA1P14867 456 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ABOP16442 354 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 MYL12AP19105 171 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 CRHBPP24387 322 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 PTGER4P35408 488 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 CDKN2AP42771 156 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 P2RY4P51582 365 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 SLC25A1P53007 311 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 EFNB1P98172 346 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ZNF91Q05481 1191 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 APOFQ13790 326 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 SLC17A1Q14916 467 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 C3AR1Q16581 482 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 SMN1Q16637 294 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 MESTQ5EB52 335 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 SLC35D3Q5M8T2 416 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 AADACL4Q5VUY2 407 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 CARD17Q5XLA6 110 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ZNF585AQ6P3V2 769 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 NIPAL3Q6P499 406 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 CREB3L2Q70SY1 520 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 AHSA2Q719I0 299 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 MEPCEQ7L2J0 689 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 AAED1Q7RTV5 226 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 SVOPQ8N4V2 548 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 NPEPL1Q8NDH3 523 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 OR9Q1Q8NGQ5 310 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ZNF519Q8TB69 540 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ZPLD1Q8TCW7 415 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 FAR1Q8WVX9 515 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ASB10Q8WXI3 467 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 RNFT2Q96EX2 444 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 MRPL48Q96GC5 212 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 CRELD1Q96HD1 420 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 TXNDC15Q96J42 360 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 TRIB1Q96RU8 372 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 ALG12Q9BV10 488 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 PRDM14Q9GZV8 571 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 SYT4Q9H2B2 425 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 MED20Q9H944 212 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 AMBNQ9NP70 447 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 GLRX2Q9NS18 164 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 B3GAT1Q9P2W7 334 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 RCE1Q9Y256 329 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 NOSIPQ9Y314 301 aaKnown RBP8.71□□□□□ -1.02
CCM2-204ENST00000470837 PCDHGB5Q9Y5G0 923 aa8.71□□□□□ -1.02
CCM2-204ENST00000470837 OR6C65A6NJZ3 312 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 ZNF814B7Z6K7 855 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 H7C1C5 153 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms