RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 IGFBP1P08833 259 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 PNMTP11086 282 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 IFI30P13284 250 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF17P17021 662 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 EIF1P41567 113 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 RBM34P42696 430 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 HTR3AP46098 478 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 RPS5P46782 204 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 LHX2P50458 406 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CLDN18P56856 261 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SMIM11AP58511 58 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 KRTAP10-2P60368 255 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 IL1RL1Q01638 556 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ROR2Q01974 943 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 PRKCDQ05655 676 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CRYZQ08257 329 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 MYBPHQ13203 477 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SELENBP1Q13228 472 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 DAG1Q14118 895 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SLC10A1Q14973 349 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 C3AR1Q16581 482 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM176BQ3YBM2 270 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 GLYR1Q49A26 553 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 GXYLT1Q4G148 440 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SYT14P1Q58G82 188 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF324BQ6AW86 544 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 LAIR2Q6ISS4 152 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 C3orf33Q6P1S2 294 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 C1orf94Q6P1W5 598 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 FAHD1Q6P587 224 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TTC33Q6PID6 262 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 PLXDC2Q6UX71 529 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF730Q6ZMV8 503 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SLC46A3Q7Z3Q1 461 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF786Q8N393 782 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TEX19Q8NA77 164 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 AQP11Q8NBQ7 271 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 FAM98AQ8NCA5 519 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 NEIL3Q8TAT5 605 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 GIPC3Q8TF64 312 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SMPDL3BQ92485 455 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 NR4A3Q92570 626 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 GCDHQ92947 438 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SNRNP40Q96DI7 357 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 BPIFA2Q96DR5 249 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 NRBF2Q96F24 287 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ADGRG7Q96K78 797 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SFXN2Q96NB2 322 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TIMP4Q99727 224 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 PSD2Q9BQI7 771 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 PIGQQ9BRB3 760 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 RHNO1Q9BSD3 238 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM43Q9BTV4 400 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 C9orf16Q9BUW7 83 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ANKRD60Q9BZ19 345 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ENKD1Q9H0I2 346 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 GABARAPL1Q9H0R8 117 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 VCXQ9H320 206 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CHCHD3Q9NX63 227 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 QPCTLQ9NXS2 382 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SMPD3Q9NY59 655 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 B4GALT7Q9UBV7 327 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 NPIPA1Q9UND3 350 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 MED31Q9Y3C7 131 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 PKD1L2Q7Z442 2459 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 USP24Q9UPU5 2620 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 MAP1BP46821 2468 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TRAV27A0A087WT01 109 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TRGV5A0A0B4J1U4 118 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ARRDC5A6NEK1 342 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 KDM4EB2RXH2 506 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 M0R129 80 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SLC16A6O15403 523 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 SEC14L5O43304 696 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF208O43345 1280 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 RAMP1O60894 148 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CH25HO95992 272 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 BGLAPP02818 100 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 HRGP04196 525 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ASAH2BP0C7U1 165 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CHMP24386 653 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 IFNA8P32881 189 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 RANBP1P43487 201 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ALDH3A2P51648 485 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TDGF1P3P51864 188 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CTBP2P56545 445 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ADARB1P78563 741 aaKnown RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 HGFACQ04756 655 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 INAQ16352 499 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF74Q16587 644 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 GAGE13Q4V321 117 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 C1orf140Q5VVS0 124 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 KDM4DQ6B0I6 523 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 KRT80Q6KB66 452 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 KLHL17Q6TDP4 642 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TMPRSS11FQ6ZWK6 438 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 HIPK1Q86Z02 1210 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 IQCF2Q8IXL9 164 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 UBQLNLQ8IYU4 475 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms