RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ENPP1P22413 925 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 RAD52P43351 418 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 EGR3Q06889 387 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 LINC00303Q3SY05 128 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 MESTQ5EB52 335 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF626Q68DY1 528 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 MED25Q71SY5 747 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 OR2T4Q8NH00 348 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 ZDHHC1Q8WTX9 485 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 DACT3Q96B18 629 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF524Q96C55 264 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 MRPL38Q96DV4 380 aaKnown RBP12.4□□□□□ -0.42
BRCA1-209ENST00000470026 TOE1Q96GM8 510 aaKnown RBP12.4□□□□□ -0.42
BRCA1-209ENST00000470026 TCTN2Q96GX1 697 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 ADAD1Q96M93 576 aaKnown RBP12.4□□□□□ -0.42
BRCA1-209ENST00000470026 LMF1Q96S06 567 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 GPR174Q9BXC1 333 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 TAS2R10Q9NYW0 307 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 UBQLN2Q9UHD9 624 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 GMEB2Q9UKD1 530 aa12.4□□□□□ -0.42
BRCA1-209ENST00000470026 TCRBV21S2A2A0A5A6 115 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 PLSCR5A0PG75 271 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 OR2W5A6NFC9 320 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 PDGFAP04085 211 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 UBL4AP11441 157 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 SSTR2P30874 369 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 RPL18Q07020 188 aaKnown RBP12.4□□□□□ -0.43
BRCA1-209ENST00000470026 BIKQ13323 160 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 CBFBQ13951 182 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 SERTAD2Q14140 314 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.4□□□□□ -0.43
BRCA1-209ENST00000470026 EEF1A1P5Q5VTE0 462 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 FDX2Q6P4F2 183 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 CBLN3Q6UW01 205 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 OR2G2Q8NGZ5 317 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 TSPAN32Q96QS1 320 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 ADAM19Q9H013 955 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 WDR76Q9H967 626 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 PCDHGA5Q9Y5G8 931 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 FKBP7Q9Y680 259 aa12.4□□□□□ -0.43
BRCA1-209ENST00000470026 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 XRCC3O43542 346 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 RPP14O95059 124 aaKnown RBP12.39□□□□□ -0.43
BRCA1-209ENST00000470026 CFDP00746 253 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-209ENST00000470026 EN2P19622 333 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-209ENST00000470026 DCTDP32321 178 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 FTMTQ8N4E7 242 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF417Q8TAU3 575 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 MCHR2Q969V1 340 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 SEC22CQ9BRL7 303 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 TMA7Q9Y2S6 64 aaKnown RBP12.39□□□□□ -0.43
BRCA1-209ENST00000470026 TMEM184BQ9Y519 407 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-209ENST00000470026 PIAS3Q9Y6X2 628 aa12.39□□□□□ -0.43
BRCA1-209ENST00000470026 TRAV8-7A0A075B6U6 113 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 H7C417 338 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF264O43296 627 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 AKR7A3O95154 331 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 PPICP45877 212 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 POU4F3Q15319 338 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 CSRP2Q16527 193 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 TCTE1Q5JU00 501 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 IDO2Q6ZQW0 420 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 FRMD1Q8N878 549 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 GATSQ8NAP1 163 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 C7orf57Q8NEG2 295 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-209ENST00000470026 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 FKRPQ9H9S5 495 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 CA10Q9NS85 328 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 GRHPRQ9UBQ7 328 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 MTFP1Q9UDX5 166 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 OR6C65A6NJZ3 312 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 TTLL8A6PVC2 850 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 MEN1O00255 615 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 PHYHO14832 338 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 UTS2O95399 124 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 F13BP05160 661 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 RRASP10301 218 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 PTHLHP12272 177 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 SLC37A1P57057 533 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 RAP2BP61225 183 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 C1orf61Q13536 156 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 CCINQ13939 588 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 GRM7Q14831 915 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 SLC25A25Q6KCM7 469 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 SDR16C5Q8N3Y7 309 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 DNAAF1Q8NEP3 725 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 PHOSPHO1Q8TCT1 267 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 GPR148Q8TDV2 347 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-209ENST00000470026 MAP3K3Q99759 626 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 GSX2Q9BZM3 304 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 LAT2Q9GZY6 243 aa12.38□□□□□ -0.43
BRCA1-209ENST00000470026 GPN1Q9HCN4 374 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-209ENST00000470026 SRA1Q9HD15 236 aaKnown RBP12.38□□□□□ -0.43
BRCA1-209ENST00000470026 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms