RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HIPK4Q8NE63 616 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 BHLHE22Q8NFJ8 381 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 UBASH3BQ8TF42 649 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 THOC1Q96FV9 657 aaKnown RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 MCHR1Q99705 422 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 B3GAT2Q9NPZ5 323 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 MRPL39Q9NYK5 338 aaKnown RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 FBXO9Q9UK97 447 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 CMAHPQ9Y471 501 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 ALPK2Q86TB3 2170 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 SONP18583 2426 aaKnown RBP11.46□□□□□ -0.57
CPSF4-210ENST00000469897 C11orf98E9PRG8 122 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 M0R3H8 397 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 OPN1SWP03999 348 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 PATE4P0C8F1 98 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 B4GALT1P15291 398 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 TCN1P20061 433 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-210ENST00000469897 GIFP27352 417 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 IL2RGP31785 369 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 MSMPQ1L6U9 139 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 LINC00114Q6XXX2 140 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 PXKQ7Z7A4 578 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 PTOV1Q86YD1 416 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 RBM45Q8IUH3 476 aaKnown RBP11.46□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF75AQ96N20 296 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 CPPED1Q9BRF8 314 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-210ENST00000469897 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.57
CPSF4-210ENST00000469897 ULBP2Q9BZM5 246 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 TPK1Q9H3S4 243 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 TAS2R5Q9NYW4 299 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 CORO2BQ9UQ03 480 aa11.46□□□□□ -0.57
CPSF4-210ENST00000469897 CR1P17927 2039 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 CPSF4LA6NMK7 179 aaKnown RBP11.45□□□□□ -0.58
CPSF4-210ENST00000469897 LILRA1O75019 489 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 CH25HO95992 272 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 THY1P04216 161 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ADORA3P0DMS8 318 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF35P13682 527 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 IFNGR1P15260 489 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF14P17017 642 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-210ENST00000469897 THBS2P35442 1172 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 GIPRP48546 466 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 PTDSS1P48651 473 aaKnown RBP11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ATP4BP51164 291 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 BIDP55957 195 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 MTPNP58546 118 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 SELPLGQ14242 412 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 SQLEQ14534 574 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 NPTX1Q15818 432 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 TRMT5Q32P41 509 aaKnown RBP11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ENTPD8Q5MY95 495 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 WDR88Q6ZMY6 472 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF627Q7L945 461 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 LRP11Q86VZ4 500 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 SKA3Q8IX90 412 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 LRRC17Q8N6Y2 441 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 GPR32P1Q8NGA4 272 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 OR4D11Q8NGI4 311 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 OR6T1Q8NGN1 323 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 OR5J2Q8NH18 312 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 DYDC1Q8WWB3 177 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ATP6V1G3Q96LB4 118 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 SNX18Q96RF0 628 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ARHGDIGQ99819 225 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 FOXB1Q99853 325 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 TMEM43Q9BTV4 400 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 EVA1AQ9H8M9 152 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 REV1Q9UBZ9 1251 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 LEF1Q9UJU2 399 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-210ENST00000469897 ANGPT4Q9Y264 503 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 NDUFAF1Q9Y375 327 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 SPEF1Q9Y4P9 236 aa11.45□□□□□ -0.58
CPSF4-210ENST00000469897 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 OR6A2O95222 327 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 MT-ATP6P00846 226 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 C8BP07358 591 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 TACSTD2P09758 323 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 HNF1AP20823 631 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 COL8A2P25067 703 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 CSNK1A1P48729 337 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 EVX1P49640 407 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 CHN2P52757 468 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 SEC24CP53992 1094 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 PCBP3P57721 371 aaKnown RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 RAB39AQ14964 217 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 TRIP10Q15642 601 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 CYP51A1Q16850 503 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 TTMPQ5BVD1 217 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 GKAP1Q5VSY0 366 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF613Q6PF04 617 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 TTC33Q6PID6 262 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-210ENST00000469897 SLC35D2Q76EJ3 337 aa11.44□□□□□ -0.58
CPSF4-210ENST00000469897 DHDDSQ86SQ9 333 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms