RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 GDNFP39905 211 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 PLCXD2Q0VAA5 305 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 MAB21L1Q13394 359 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 SMAD4Q13485 552 aaKnown RBP13.3□□□□□ -0.28
CBWD3-205ENST00000469687 ALKBH1Q13686 389 aaKnown RBP13.3□□□□□ -0.28
CBWD3-205ENST00000469687 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-205ENST00000469687 BTBD16Q32M84 506 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 BICRALQ6AI39 1079 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 LAMTOR1Q6IAA8 161 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 STAC2Q6ZMT1 411 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 LINGO2Q7L985 606 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 FAM220AQ7Z4H9 259 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 OR11H7Q8NGC8 314 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 OR51A4Q8NGJ6 313 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-205ENST00000469687 SCMH1Q96GD3 660 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 ULBP3Q9BZM4 244 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 VN1R1Q9GZP7 353 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 GHITMQ9H3K2 345 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 ZNF304Q9HCX3 659 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 CTSFQ9UBX1 484 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 LAMP5Q9UJQ1 280 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 MOKQ9UQ07 419 aa13.3□□□□□ -0.28
CBWD3-205ENST00000469687 IGHV3-20A0A0C4DH32 117 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 HIST1H2ABP04908 130 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 EPHA4P54764 986 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 PITPNAQ00169 270 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 MRPL28Q13084 256 aaKnown RBP13.29□□□□□ -0.28
CBWD3-205ENST00000469687 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 ARHGAP40Q5TG30 622 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 HACD4Q5VWC8 232 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 HIST3H2AQ7L7L0 130 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-205ENST00000469687 SLC25A45Q8N413 288 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 BEST4Q8NFU0 473 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 CADM4Q8NFZ8 388 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 OR5AK2Q8NH90 309 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 SMIM4Q8WVI0 70 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 HIST1H2ACQ93077 130 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 PTDSS2Q9BVG9 487 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 CACNG6Q9BXT2 260 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 SLA2Q9H6Q3 261 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 BEX1Q9HBH7 125 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 SLCO1C1Q9NYB5 712 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 KCNG2Q9UJ96 466 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 V9GY05 133 aa13.29□□□□□ -0.28
CBWD3-205ENST00000469687 C7orf66A4D0T2 115 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 DMWDQ09019 674 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 TNK1Q13470 666 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 Q499Y3 187 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 HLA-DQA1Q5Y7H0 255 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 SLC6A19Q695T7 634 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 D2HGDHQ8N465 521 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 OR2T4Q8NH00 348 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 OR8K3Q8NH51 312 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 THEM6Q8WUY1 208 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 PHF21AQ96BD5 680 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 MVB12AQ96EY5 273 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 DPYSL5Q9BPU6 564 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 TBL1XR1Q9BZK7 514 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 MED28Q9H204 178 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 CHRDQ9H2X0 955 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 NIPAL2Q9H841 368 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 OR5V1Q9UGF6 321 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 MRTO4Q9UKD2 239 aaKnown RBP13.28□□□□□ -0.28
CBWD3-205ENST00000469687 FRYLO94915 3013 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 TRAV8-7A0A075B6U6 113 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 ALG1L2C9J202 215 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 FABP7O15540 132 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 GMDSO60547 372 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 DHFRP00374 187 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 TACSTD2P09758 323 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 CXCL3P19876 107 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 ALOX5APP20292 161 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 SLC6A8P48029 635 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 PLA2G7Q13093 441 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 PRSS35Q8N3Z0 413 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 OR1N1Q8NGS0 311 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 OR52I2Q8NH67 350 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 PHYHIPQ92561 330 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 NUDT22Q9BRQ3 303 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 OR11A1Q9GZK7 315 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 NUBP2Q9Y5Y2 271 aa13.28□□□□□ -0.28
CBWD3-205ENST00000469687 KIF26BQ2KJY2 2108 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 H0YC42 278 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 PDCD5O14737 125 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 GSTZ1O43708 216 aaPredicted RBP13.27□□□□□ -0.28
CBWD3-205ENST00000469687 ITGA10O75578 1167 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 RENP00797 406 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.28
CBWD3-205ENST00000469687 ETFDHQ16134 617 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 EMC4Q5J8M3 183 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 OR5M10Q6IEU7 315 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 PWWP2BQ6NUJ5 590 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 SLC35D2Q76EJ3 337 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 PLXDC1Q8IUK5 500 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 OR2G2Q8NGZ5 317 aa13.27□□□□□ -0.28
CBWD3-205ENST00000469687 SYNPRQ8TBG9 265 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms