RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 BCHEP06276 602 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GUSBP08236 651 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 LINGO3P0C6S8 592 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 HNRNPCL4P0DMR1 293 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 PSG1P11464 419 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GP1BBP13224 206 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF17P17021 662 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 SRD5A1P18405 259 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 TCEA1P23193 301 aaKnown RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ELK4P28324 431 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 PTPN6P29350 595 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 CHRNB4P30926 498 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 DCTDP32321 178 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 MRPL19P49406 292 aaKnown RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 P2RX1P51575 399 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 TDGF1P3P51864 188 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 CDH12P55289 794 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 CTBP2P56545 445 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 C3AR1Q16581 482 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 PDZK1Q5T2W1 519 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 CCNJQ5T5M9 372 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GKAP1Q5VSY0 366 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 CES4AQ5XG92 561 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF324BQ6AW86 544 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 Q6ZPB1 254 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 LRRC74BQ6ZQY2 392 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF550Q7Z398 422 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 DHDDSQ86SQ9 333 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GALNT10Q86SR1 603 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 YRDCQ86U90 279 aaKnown RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GPAT4Q86UL3 456 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 SIAH3Q8IW03 269 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 UBQLNLQ8IYU4 475 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GATSQ8NAP1 163 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 CHDHQ8NE62 594 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 OR5D16Q8NGK9 328 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 OR5M9Q8NGP3 310 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 BBS10Q8TAM1 723 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM163Q8TC26 289 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 PNPT1Q8TCS8 783 aaKnown RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 LZICQ8WZA0 190 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 VPS33AQ96AX1 596 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 RNF183Q96D59 192 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 OTUB1Q96FW1 271 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 C16orf58Q96GQ5 468 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF48Q96MX3 618 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 EBF4Q9BQW3 602 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 SH2D2AQ9NP31 389 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 KCNJ16Q9NPI9 418 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 DEPPQ9NTK1 212 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF446Q9NWS9 450 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 MED11Q9P086 117 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 C6orf203Q9P0P8 240 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 AASSQ9UDR5 926 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 MKLN1Q9UL63 735 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 VDAC3Q9Y277 283 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 NTNG1Q9Y2I2 539 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 MEMO1Q9Y316 297 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 AP4B1Q9Y6B7 739 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ATRXP46100 2492 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 ESPL1Q14674 2120 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 NBEAQ8NFP9 2946 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 A0A0G2JMM0 328 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 A0A1W2PPB8 328 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 A0A1W2PRS3 328 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 SERINC4A6NH21 518 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 KIR3DP1A8MWS1 328 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 C9JVG2 144 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 PRSS44E7EML9 344 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 IFNL4K9M1U5 179 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 MRASO14807 208 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 SEC14L5O43304 696 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 UBTFL6P0CB48 400 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-208ENST00000469585 TFPIP10646 304 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 COX6B1P14854 86 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 POU1F1P28069 291 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 OPRM1P35372 400 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 ZFP36L2P47974 494 aaKnown RBP5.56□□□□□ -1.52
PTCD3-208ENST00000469585 CASP9P55211 416 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 CSNK2A1P68400 391 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-208ENST00000469585 FAM27E3Q08E93 113 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 SELENBP1Q13228 472 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 RGNQ15493 299 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 BCL2A1Q16548 175 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 TRMT5Q32P41 509 aaKnown RBP5.56□□□□□ -1.52
PTCD3-208ENST00000469585 SLC25A35Q3KQZ1 300 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 COQ5Q5HYK3 327 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 NHSL2Q5HYW2 709 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF311Q5JNZ3 666 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTCD3-208ENST00000469585 PRAMEF8Q5VWM4 474 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 PRAMEF7Q5VXH5 474 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 FAM219BQ5XKK7 198 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 REEP3Q6NUK4 255 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 C3orf33Q6P1S2 294 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 ERICH5Q6P6B1 374 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 TBC1D26Q86UD7 250 aa5.56□□□□□ -1.52
PTCD3-208ENST00000469585 RANBP3LQ86VV4 465 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms