RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TVP23BQ9NYZ1 205 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF346Q9UL40 294 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RCE1Q9Y256 329 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 IER3IP1Q9Y5U9 82 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 NBEAQ8NFP9 2946 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 CD8B2A6NJW9 211 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF724A8MTY0 619 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 AHRRA9YTQ3 701 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 NPIPA5E9PKD4 350 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 PRODHO43272 600 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 RNF13O43567 381 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 MRPS14O60783 128 aaKnown RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 SLC2A10O95528 541 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 IFNGP01579 166 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 HOXD4P09016 255 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 PIPP12273 146 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 HLA-DOBP13765 273 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 HIST1H1CP16403 213 aaKnown RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 CRHBPP24387 322 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 GTF2E2P29084 291 aaKnown RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 PTGER4P35408 488 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 CDKN2AP42771 156 aaKnown RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 DAP3P51398 398 aaKnown RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 CHN2P52757 468 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ERVK-25P63136 954 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ITGADQ13349 1161 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 TOP3AQ13472 1001 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 SNAPC1Q16533 368 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 RBM48Q5RL73 367 aaKnown RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 NXNL2Q5VZ03 156 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 FAM180AQ6UWF9 173 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 PTCHD4Q6ZW05 846 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 SLC35D2Q76EJ3 337 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ZBTB46Q86UZ6 589 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 TMEM123Q8N131 208 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 TCEANCQ8N8B7 351 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 SLC37A3Q8NCC5 494 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 OR9K2Q8NGE7 335 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF845Q96IR2 970 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 LRR1Q96L50 414 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 CNBD2Q96M20 576 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 Q96MT0 163 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 TUBA1CQ9BQE3 449 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ALG12Q9BV10 488 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 MARCH7Q9H992 704 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF71Q9NQZ8 489 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-204ENST00000469232 IMPAD1Q9NX62 359 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 IL20RAQ9UHF4 553 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 NPIPA1Q9UND3 350 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 FLVCR1Q9Y5Y0 555 aa7.26□□□□□ -1.25
NPHP3-204ENST00000469232 A0A1W2PRG6 482 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 PRSS37A4D1T9 235 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 OR6C68A6NDL8 312 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 CCDC182A6NF36 153 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 RIIAD1A6NNX1 92 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 J3QRE1 110 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 SLC1A7O00341 560 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 TLX2O43763 284 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 OR6A2O95222 327 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 F13BP05160 661 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 PGA4P0DJD7 388 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 PGA3P0DJD8 388 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 IFNGR1P15260 489 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF3P17036 446 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 RPL4P36578 427 aaKnown RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 EIF1AXP47813 144 aaKnown RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 GABARAPL2P60520 117 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 SLC35A2P78381 396 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 IL5RAQ01344 420 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 KRR1Q13601 381 aaKnown RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 CRMP1Q14194 572 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 GGTLC2Q14390 218 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 RNPS1Q15287 305 aaKnown RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 STK11Q15831 433 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 RNLSQ5VYX0 342 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 NIPAL3Q6P499 406 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 FCRLAQ7L513 359 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 HDDC2Q7Z4H3 204 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 IGFN1Q86VF2 1251 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 GID4Q8IVV7 300 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 UEVLDQ8IX04 471 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 FNDC8Q8TC99 324 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 SMPDL3BQ92485 455 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 KISS1RQ969F8 398 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 RASD2Q96D21 266 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 SNRNP40Q96DI7 357 aaKnown RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 TXNDC15Q96J42 360 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF582Q96NG8 517 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 JAM3Q9BX67 310 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 LDAHQ9H6V9 325 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 CALHM2Q9HA72 323 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 CNOT2Q9NZN8 540 aaKnown RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 GRHPRQ9UBQ7 328 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 PSORS1C1Q9UIG5 152 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 FOXD3Q9UJU5 478 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-204ENST00000469232 FKBP7Q9Y680 259 aa7.25□□□□□ -1.25
NPHP3-204ENST00000469232 ALPK2Q86TB3 2170 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms