RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 VSX1Q9NZR4 365 aaPredicted RBP10□□□□□ -0.81
MSH5-214ENST00000468602 MALT1Q9UDY8 824 aa10□□□□□ -0.81
MSH5-214ENST00000468602 NDRG4Q9ULP0 352 aaKnown RBP10□□□□□ -0.81
MSH5-214ENST00000468602 EMC9Q9Y3B6 208 aa10□□□□□ -0.81
MSH5-214ENST00000468602 H0YAE9 185 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 J3QKU1 62 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 ZNHIT1O43257 154 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 RNF13O43567 381 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 BCL10O95999 233 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 HMGN1P05114 100 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 TMIGD3P0DMS9 266 aaPredicted RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 HLA-DOBP13765 273 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 POU2F1P14859 743 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 PTNP21246 168 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 PTDSS1P48651 473 aaKnown RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 CTXN1P60606 82 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 POU3F1Q03052 451 aaPredicted RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 KEAP1Q14145 624 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 PTGES3Q15185 160 aaKnown RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 NRN1LQ496H8 165 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 TMEM201Q5SNT2 666 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 ANKRD34AQ69YU3 496 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 SLC27A4Q6P1M0 643 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 MCEMP1Q8IX19 187 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 TUSC5Q8IXB3 177 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 RPRMLQ8N4K4 120 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 POMGNT2Q8NAT1 580 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 NAXEQ8NCW5 288 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 MAGEE2Q8TD90 523 aaPredicted RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 TRUB1Q8WWH5 349 aaKnown RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 ASB5Q8WWX0 329 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 RND1Q92730 232 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 TMEM54Q969K7 222 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 STARD4Q96DR4 205 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 SAMD8Q96LT4 415 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 ZNF385AQ96PM9 386 aaKnown RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 OR2M2Q96R28 347 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 VCXQ9H320 206 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 FN3KQ9H479 309 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 EGLN3Q9H6Z9 239 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 CMC2Q9NRP2 79 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 KIF17Q9P2E2 1029 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 ZNF346Q9UL40 294 aaKnown RBP9.99□□□□□ -0.81
MSH5-214ENST00000468602 OSGIN2Q9Y236 505 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 FREM1Q5H8C1 2179 aa9.99□□□□□ -0.81
MSH5-214ENST00000468602 DIDO1Q9BTC0 2240 aaKnown RBP9.98□□□□□ -0.81
MSH5-214ENST00000468602 ABCA12Q86UK0 2595 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 IGHV3-15A0A0B4J1V0 119 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 TRGV8A0A0C4DH27 118 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 A0A0G2JNJ9 132 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 MSTNO14793 375 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 F13BP05160 661 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 PGA4P0DJD7 388 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 PGA3P0DJD8 388 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 IFNGR1P15260 489 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 GNLYP22749 145 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 SMSP52788 366 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 SRSF1Q07955 248 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■■□□ 14.8
MSH5-214ENST00000468602 PMPCAQ10713 525 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 IL18R1Q13478 541 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 C1DQ13901 141 aaKnown RBP9.98□□□□□ -0.81
MSH5-214ENST00000468602 IGFBP7Q16270 282 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 PGGHGQ32M88 737 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 SLC25A35Q3KQZ1 300 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 C10orf128Q5T292 105 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 LPCAT4Q643R3 524 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 C12orf73Q69YU5 71 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 TFAP2EQ6VUC0 442 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 P4HA3Q7Z4N8 544 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 MRGPRGQ86SM5 289 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 C20orf196Q8IYI0 205 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 TEX47Q8TBZ9 253 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 TSPAN32Q96QS1 320 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 KATNB1Q9BVA0 655 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 TSSK6Q9BXA6 273 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 PRRG3Q9BZD7 231 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 NMNAT2Q9BZQ4 307 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 OR10A4Q9H209 315 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 Q9UFV3 132 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 KLHL21Q9UJP4 597 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 NOSIPQ9Y314 301 aaKnown RBP9.98□□□□□ -0.81
MSH5-214ENST00000468602 ORC6Q9Y5N6 252 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 HSPE1-MOB4S4R3N1 261 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 DOPEY1Q5JWR5 2465 aa9.98□□□□□ -0.81
MSH5-214ENST00000468602 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
MSH5-214ENST00000468602 PRSS37A4D1T9 235 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 SLC35F4A4IF30 521 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 CCL21O00585 134 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 MITFO75030 526 aaPredicted RBP9.97□□□□□ -0.81
MSH5-214ENST00000468602 MRPL33O75394 65 aaKnown RBP9.97□□□□□ -0.81
MSH5-214ENST00000468602 IGHG1P01857 330 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 ACADSP16219 412 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 AHCYP23526 432 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 CHRNB4P30926 498 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 VHLP40337 213 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 HSPA13P48723 471 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 CENPAP49450 140 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 CLDN17P56750 224 aa9.97□□□□□ -0.81
MSH5-214ENST00000468602 ADARB1P78563 741 aaKnown RBP9.97□□□□□ -0.81
MSH5-214ENST00000468602 ADORA2A-AS1P86434 159 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms