RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ERVK-18Q9QC07 812 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 ENOPH1Q9UHY7 261 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF443Q9Y2A4 671 aaPredicted RBP12.85□□□□□ -0.35
COL27A1-203ENST00000468565 IFT52Q9Y366 437 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 ENPP4Q9Y6X5 453 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 IGHV3-15A0A0B4J1V0 119 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF208O43345 1280 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 RGS10O43665 173 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 PMS2P2O95744 297 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 BCL10O95999 233 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 IFNW1P05000 195 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 TFPIP10646 304 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 CRYGSP22914 178 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 SLC35A2P78381 396 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 MVKQ03426 396 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 FGD3Q5JSP0 725 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 TFAP2EQ6VUC0 442 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
COL27A1-203ENST00000468565 BBS10Q8TAM1 723 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ARMC7Q9H6L4 198 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ING1Q9UK53 422 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF232Q9UNY5 417 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 F8P00451 2351 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 TMED7-TICAM2A0A0A6YYA0 188 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF724A8MTY0 619 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 RHCEP18577 417 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 PSMB1P20618 241 aaKnown RBP12.84□□□□□ -0.35
COL27A1-203ENST00000468565 GGT2P36268 569 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 PRRC2AP48634 2157 aaKnown RBP12.84□□□□□ -0.35
COL27A1-203ENST00000468565 EMX1Q04741 257 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-203ENST00000468565 RASGEF1BQ0VAM2 473 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 PAMR1Q6UXH9 720 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 SPNS3Q6ZMD2 512 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 MED13LQ71F56 2210 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF550Q7Z398 422 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 RAI1Q7Z5J4 1906 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF540Q8NDQ6 660 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 SLC35B4Q969S0 331 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ZHX1-C8orf76Q96EF9 292 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 FUNDC2Q9BWH2 189 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ADAM19Q9H013 955 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 LIME1Q9H400 295 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 RLIMQ9NVW2 624 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 ENPP5Q9UJA9 477 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 OSGIN1Q9UJX0 560 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 TRAPPC4Q9Y296 219 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 TMED7Q9Y3B3 224 aa12.84□□□□□ -0.35
COL27A1-203ENST00000468565 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 DEFB108AA8MXU0 73 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 INMTO95050 263 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 CCNB2O95067 398 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 GADD45GO95257 159 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 DNASE1P24855 282 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 EPHA2P29317 976 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 TACR3P29371 465 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 ACAA2P42765 397 aaKnown RBP12.83□□□□□ -0.36
COL27A1-203ENST00000468565 ABLIM2Q6H8Q1 611 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 P3H2Q8IVL5 708 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 DEPDC4Q8N2C3 294 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 SMYD1Q8NB12 490 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 OR52J3Q8NH60 311 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 FOXC2Q99958 501 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
COL27A1-203ENST00000468565 IGKV3D-15A0A087WSY6 115 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 ARRDC5A6NEK1 342 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 SIAH2O43255 324 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 HMGA2P52926 109 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 ART1P52961 327 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 GP2P55259 537 aaKnown RBP12.82□□□□□ -0.36
COL27A1-203ENST00000468565 POU4F3Q15319 338 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF311Q5JNZ3 666 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 PRSS48Q7RTY5 328 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 ENTHD1Q8IYW4 607 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 GABRG1Q8N1C3 465 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 CLIP4Q8N3C7 705 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 RASSF5Q8WWW0 418 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 PROX1Q92786 737 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF607Q96SK3 696 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 OR11A1Q9GZK7 315 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 MT-ND2P03891 347 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 GKN3PP0CG01 181 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
COL27A1-203ENST00000468565 KLK2P20151 261 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 OR3A2P47893 321 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 COPZ1P61923 177 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 TEKQ02763 1124 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 C22orf34Q6ZV56 151 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms