RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RNF13O43567 381 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 TRAF3IP2O43734 574 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 FAM107AO95990 144 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 MT-ND1P03886 318 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 THRBP10828 461 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 FUT1P19526 365 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 MSX2P35548 267 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 CDH11P55287 796 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 ROR2Q01974 943 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 LINGO2Q7L985 606 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 PXKQ7Z7A4 578 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 FITM2Q8N6M3 262 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 PIK3C3Q8NEB9 887 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 KBTBD8Q8NFY9 601 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 SPATA3Q8NHX4 192 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 GEMIN6Q8WXD5 167 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 NSL1Q96IY1 281 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 HSH2DQ96JZ2 352 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 HS6ST2Q96MM7 605 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 OR2M2Q96R28 347 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF426Q9BUY5 554 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 FNDC11Q9BVV2 318 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 LINC00470Q9BZP3 86 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 FKRPQ9H9S5 495 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 FAM53CQ9NYF3 392 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 NPAP1Q9NZP6 1156 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF229Q9UJW7 825 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 RPS6KA6Q9UK32 745 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 ADAM21Q9UKJ8 722 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 MED31Q9Y3C7 131 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 B2RBV5 119 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 M0R1B8 84 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 ABCD4O14678 606 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 WNT11O96014 354 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 CD8AP01732 235 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 BMP4P12644 408 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 RBM34P42696 430 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 PRPS1P60891 318 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 ARF1P84077 181 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 ZP4Q12836 540 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 SAMD4BQ5PRF9 694 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 KLHL24Q6TFL4 600 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 C16orf89Q6UX73 402 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 NHLRC1Q6VVB1 395 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 NANOGNBQ7Z5D8 188 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 DEFB107AQ8IZN7 70 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 PGAM4Q8N0Y7 254 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 C17orf78Q8N4C9 275 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 OR1K1Q8NGR3 316 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 NEUROG1Q92886 237 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 SGTBQ96EQ0 304 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 PRRC1Q96M27 445 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 RHNO1Q9BSD3 238 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 GPR35Q9HC97 309 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 C20orf141Q9NUB4 165 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 TAS2R5Q9NYW4 299 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
CCHCR1-211ENST00000467553 ABCA1O95477 2261 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 COL6A5A8TX70 2615 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 ATRQ13535 2644 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 A0A096LPE4 126 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 CD5LO43866 347 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 PIP5K1CO60331 668 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 OR7A10O76100 309 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 IGHV4-39P01824 125 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 ASAH2BP0C7U1 165 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 IFNGR1P15260 489 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 FUT4P22083 530 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 CDKN1AP38936 164 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 MNAT1P51948 309 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 BIDP55957 195 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 KRT72Q14CN4 511 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 TBRG1Q3YBR2 411 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 PHYHD1Q5SRE7 291 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF544Q6NX49 715 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC35D2Q76EJ3 337 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC46A3Q7Z3Q1 461 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 WDFY1Q8IWB7 410 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 RBM15BQ8NDT2 890 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 OR6N1Q8NGY5 312 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 BCL2L2Q92843 193 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF837Q96EG3 531 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 B3GAT2Q9NPZ5 323 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 CBLN4Q9NTU7 201 aa12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 DCAF13Q9NV06 445 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-211ENST00000467553 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms