RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 CARMIL3Q8ND23 1372 aa2.23□□□□□ -2.05
SMC4-207ENST00000467263 IGLV2-18A0A075B6J9 118 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 A0A0U1RQS6 177 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 CCDC182A6NF36 153 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 IGLV3-19P01714 112 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 MUC1P15941 1255 aaPredicted RBP2.22□□□□□ -2.05
SMC4-207ENST00000467263 ZNF14P17017 642 aaPredicted RBP2.22□□□□□ -2.05
SMC4-207ENST00000467263 SLC2A5P22732 501 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 NPY1RP25929 384 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 PSMA5P28066 241 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 NCBP2P52298 156 aaKnown RBP eCLIP2.22□□□□□ -2.05
SMC4-207ENST00000467263 ERVK-25P63136 954 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 NCBP1Q09161 790 aaKnown RBP2.22□□□□□ -2.05
SMC4-207ENST00000467263 AQP6Q13520 282 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 KLHL38Q2WGJ6 581 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 TTLL9Q3SXZ7 439 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 VAX1Q5SQQ9 334 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 OR4F3Q6IEY1 312 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 PYROXD1Q8WU10 500 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 GEMIN6Q8WXD5 167 aaKnown RBP2.22□□□□□ -2.05
SMC4-207ENST00000467263 SMARCD2Q92925 531 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 LINC00477Q96M19 166 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 ZNF641Q96N77 438 aaPredicted RBP2.22□□□□□ -2.05
SMC4-207ENST00000467263 GABARAPL3Q9BY60 117 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 RMND5AQ9H871 391 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 POLE4Q9NR33 117 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 SNX6Q9UNH7 406 aa2.22□□□□□ -2.05
SMC4-207ENST00000467263 MN1Q10571 1320 aaPredicted RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 IGKV1D-13A0A0B4J2D9 117 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 A0A1W2PP18 115 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 INS-IGF2F8WCM5 200 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 BET1O15155 118 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 RBBP9O75884 186 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 CISD3P0C7P0 127 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 IGKV1-13P0DP09 117 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 PRPS2P11908 318 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 NCK1P16333 377 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 DUSP3P51452 185 aaPredicted RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 SLC7A9P82251 487 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 CDK16Q00536 496 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 FILIP1LQ4L180 1135 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 CCDC92Q53HC0 331 aaPredicted RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 ZNF836Q6ZNA1 936 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 FAM92BQ6ZTR7 304 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 NCCRP1Q6ZVX7 275 aaPredicted RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 UTS2BQ765I0 119 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 HMGN2P46Q86SG4 172 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 OR2T3Q8NH03 318 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 MAGEE2Q8TD90 523 aaPredicted RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 SDR42E1Q8WUS8 393 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 EMG1Q92979 244 aaKnown RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 SGK3Q96BR1 496 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 MED8Q96G25 268 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 RBM14Q96PK6 669 aaKnown RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 OR2A5Q96R48 311 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 MRPL47Q9HD33 250 aaKnown RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 ADAP2Q9NPF8 381 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 CD84Q9UIB8 345 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 PTBP2Q9UKA9 531 aaKnown RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 PACSIN2Q9UNF0 486 aaPredicted RBP2.21□□□□□ -2.06
SMC4-207ENST00000467263 AP1M2Q9Y6Q5 423 aa2.21□□□□□ -2.06
SMC4-207ENST00000467263 IGHV5-51A0A0C4DH38 117 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 IGHV3-66A0A0C4DH42 116 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 SCGNO76038 276 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 C6orf47O95873 294 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 GAPDHP04406 335 aaKnown RBP2.2□□□□□ -2.06
SMC4-207ENST00000467263 SMIM10L1P0DMW3 83 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 TCN1P20061 433 aaPredicted RBP2.2□□□□□ -2.06
SMC4-207ENST00000467263 RORAP35398 523 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 GPR6P46095 362 aaPredicted RBP2.2□□□□□ -2.06
SMC4-207ENST00000467263 NPBWR2P48146 333 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 SUB1P53999 127 aaKnown RBP eCLIP2.2□□□□□ -2.06
SMC4-207ENST00000467263 RPS21P63220 83 aaKnown RBP2.2□□□□□ -2.06
SMC4-207ENST00000467263 PDZK1Q5T2W1 519 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 SLC25A24Q6NUK1 477 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 H2AFVQ71UI9 128 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 NUDCD3Q8IVD9 361 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 FAM110BQ8TC76 370 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 PHF10Q8WUB8 498 aaKnown RBP2.2□□□□□ -2.06
SMC4-207ENST00000467263 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.2□□□□□ -2.06
SMC4-207ENST00000467263 SMIM10Q96HG1 83 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 MS4A4EQ96PG1 132 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 MCCC2Q9HCC0 563 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 EXD2Q9NVH0 621 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 MSH6P52701 1360 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 CEMIPQ8WUJ3 1361 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 GPR179Q6PRD1 2367 aa2.2□□□□□ -2.06
SMC4-207ENST00000467263 A0A1B0GVI7 797 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 KMOO15229 486 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 ADRA2AP08913 450 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 UBTFL1P0CB47 393 aaPredicted RBP2.19□□□□□ -2.06
SMC4-207ENST00000467263 OPRD1P41143 372 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 ATP1B3P54709 279 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 RAP1AP62834 184 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 KLHL30Q0D2K2 578 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 SCRN3Q0VDG4 424 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 TRIM40Q6P9F5 258 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 STRADAQ7RTN6 431 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 TRIM69Q86WT6 500 aa2.19□□□□□ -2.06
SMC4-207ENST00000467263 MREGQ8N565 214 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms