RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FAM118AQ9NWS6 357 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 EMC3Q9P0I2 261 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 SH3BGRL2Q9UJC5 107 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 ZNF346Q9UL40 294 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 NDRG4Q9ULP0 352 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 CLEC4AQ9UMR7 237 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 BAIAP2Q9UQB8 552 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 RCE1Q9Y256 329 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 MEMO1Q9Y316 297 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 ORC6Q9Y5N6 252 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 IER3IP1Q9Y5U9 82 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 TRGV8A0A0C4DH27 118 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 TEX13CA0A0J9YWL9 993 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 A0A1W2PRG6 482 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 GPR171O14626 319 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 IDH3BO43837 385 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 SERPINI2O75830 405 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 CRHP06850 196 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 GNLYP22749 145 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 SDHAP31040 664 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 DAP3P51398 398 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 SMSP52788 366 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 CLDN17P56750 224 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 ADARB1P78563 741 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 RUNX1T1Q06455 604 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 FOXF2Q12947 444 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 TOP3AQ13472 1001 aaPredicted RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 KRR1Q13601 381 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 C1DQ13901 141 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 GTF2IRD2BQ6EKJ0 949 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 IZUMO2Q6UXV1 221 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 FAM214BQ7L5A3 538 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 NUFIP2Q7Z417 695 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 GTF2IRD2Q86UP8 949 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 GCNT2Q8N0V5 402 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 ARIH2OSQ8N7S6 290 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 OR6X1Q8NH79 312 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 ZNF775Q96BV0 537 aaPredicted RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 INTS12Q96CB8 462 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 RASD2Q96D21 266 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 HRASLS5Q96KN8 279 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 ZNF570Q96NI8 536 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 ERMAPQ96PL5 475 aaPredicted RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 OR2M2Q96R28 347 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 DDOQ99489 341 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 VCXQ9H320 206 aa9.88□□□□□ -0.83
VCP-204ENST00000466100 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
VCP-204ENST00000466100 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 SLC35F4A4IF30 521 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 CENPBD1B2RD01 187 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 SURF4O15260 269 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 BCL10O95999 233 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 PGA4P0DJD7 388 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 PGA3P0DJD8 388 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 TMIGD3P0DMS9 266 aaPredicted RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 HIST1H1CP16403 213 aaKnown RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 GGT2P36268 569 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 SELENOPP49908 381 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 RPS6KA3P51812 740 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 CASP6P55212 293 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 BIDP55957 195 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 EFNB1P98172 346 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 MYBPC1Q00872 1141 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 PMPCAQ10713 525 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 KEAP1Q14145 624 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 HIST3H3Q16695 136 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 EIF2S3LQ2VIR3 472 aaKnown RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 VWA1Q6PCB0 445 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 PTCHD4Q6ZW05 846 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 MCEMP1Q8IX19 187 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 HDAC2Q92769 488 aaKnown RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 NMD3Q96D46 503 aaKnown RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 SLC25A44Q96H78 314 aaPredicted RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 ADAD1Q96M93 576 aaKnown RBP9.87□□□□□ -0.83
VCP-204ENST00000466100 KCNK17Q96T54 332 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 ADI1Q9BV57 179 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 EMC6Q9BV81 110 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 Q9UFV3 132 aa9.87□□□□□ -0.83
VCP-204ENST00000466100 LOC100130705A0A1B0GUX0 176 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 A6NIZ1 184 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 H0YAE9 185 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 M0R129 80 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 AKAP8O43823 692 aaKnown RBP9.86□□□□□ -0.83
VCP-204ENST00000466100 TRMUO75648 421 aaKnown RBP9.86□□□□□ -0.83
VCP-204ENST00000466100 SLC2A10O95528 541 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 CGAP01215 116 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 IL2RAP01589 272 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 ACADSP16219 412 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 CTSSP25774 331 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 ACVR1BP36896 505 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 CAPGP40121 348 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 CDKN2AP42771 156 aaKnown RBP9.86□□□□□ -0.83
VCP-204ENST00000466100 OR3A2P47893 321 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 ZNF133P52736 654 aaPredicted RBP9.86□□□□□ -0.83
VCP-204ENST00000466100 RAP1BP61224 184 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 RAP1AP62834 184 aa9.86□□□□□ -0.83
VCP-204ENST00000466100 SIRPAP78324 504 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms