RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SLC25A48Q6ZT89 311 aaKnown RBP2.34□□□□□ -2.03
SMC4-205ENST00000465563 ARRDC1Q8N5I2 433 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 OR10G2Q8NGC3 310 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 OR6C4Q8NGE1 309 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 ACOT11Q8WXI4 607 aaPredicted RBP2.34□□□□□ -2.03
SMC4-205ENST00000465563 ARPC1AQ92747 370 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 LRRC58Q96CX6 371 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 CXorf40BQ96DE9 158 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 FCRL1Q96LA6 429 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 RIOK2Q9BVS4 552 aaKnown RBP2.34□□□□□ -2.03
SMC4-205ENST00000465563 ROPN1BQ9BZX4 212 aaPredicted RBP2.34□□□□□ -2.03
SMC4-205ENST00000465563 GIN1Q9NXP7 522 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 QPCTLQ9NXS2 382 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 OPN4Q9UHM6 478 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 KCNIP3Q9Y2W7 256 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 IGLV3-22A0A075B6J6 115 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 SYNJ2BP-COX16A0A087WUM0 186 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 PCP4L1A6NKN8 68 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 HIP1O00291 1037 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 C1orf105O95561 183 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 KLK3P07288 261 aaPredicted RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 TDGF1P13385 188 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 ATP1B2P14415 290 aaPredicted RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 CMA1P23946 247 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 CD1CP29017 333 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 BTCP35070 178 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 GLP1RP43220 463 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 YAP1P46937 504 aaKnown RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 ARRB1P49407 418 aaPredicted RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 TDGF1P3P51864 188 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 CDH4P55283 916 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 IRX3P78415 501 aaPredicted RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 SCRN3Q0VDG4 424 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 BST1Q10588 318 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 PLD1Q13393 1074 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 GNMTQ14749 295 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 ZNF546Q86UE3 836 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 ECHDC2Q86YB7 292 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 EGFL6Q8IUX8 553 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 MFSD6LQ8IWD5 586 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 CCDC65Q8IXS2 484 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 NPBQ8NG41 125 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 OR9G1Q8NH87 305 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 LINC00477Q96M19 166 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 CNN2Q99439 309 aaKnown RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 SLC39A3Q9BRY0 314 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 NMRAL1Q9HBL8 299 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 CCL28Q9NRJ3 127 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 BFARQ9NZS9 450 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 MARCOQ9UEW3 520 aaPredicted RBP2.33□□□□□ -2.04
SMC4-205ENST00000465563 KANK1Q14678 1352 aa2.33□□□□□ -2.04
SMC4-205ENST00000465563 A0A0G2JN53 185 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 HAS3O00219 553 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 PALMO75781 387 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 OR7A10O76100 309 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 FGF1P05230 155 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 CT62P0C5K7 136 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 ICAM2P13598 275 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 CRISP2P16562 243 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 FDFT1P37268 417 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 VDAC2P45880 294 aaPredicted RBP2.32□□□□□ -2.04
SMC4-205ENST00000465563 NPBWR2P48146 333 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 GPM6AP51674 278 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 ACTA2P62736 377 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 ACTC1P68032 377 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 DDX39BQ13838 428 aaKnown RBP2.32□□□□□ -2.04
SMC4-205ENST00000465563 NRF1Q16656 503 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 ABCA11PQ4W5N1 156 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 MARCH8Q5T0T0 291 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 ZNF620Q6ZNG0 422 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 C6orf120Q7Z4R8 191 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 PAQR7Q86WK9 346 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 NUDCD3Q8IVD9 361 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 MMAAQ8IVH4 418 aaKnown RBP2.32□□□□□ -2.04
SMC4-205ENST00000465563 SDR9C7Q8NEX9 313 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 OR2L3Q8NG85 312 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.32□□□□□ -2.04
SMC4-205ENST00000465563 TUBGCP3Q96CW5 907 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 PANX2Q96RD6 677 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 ACTR6Q9GZN1 396 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 PPA2Q9H2U2 334 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 SRMSQ9H3Y6 488 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 XCL2Q9UBD3 114 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 TMCO1Q9UM00 188 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 PEX16Q9Y5Y5 336 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 NPTNQ9Y639 398 aa2.32□□□□□ -2.04
SMC4-205ENST00000465563 COL5A1P20908 1838 aaPredicted RBP2.32□□□□□ -2.04
SMC4-205ENST00000465563 ARHGEF35A5YM69 484 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 RBMY1BA6NDE4 496 aaKnown RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 BTBD17A6NE02 478 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 RBMY1EA6NEQ0 496 aaKnown RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 LAD1O00515 517 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 IGKV1D-16P01601 117 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 IGHV2-5P01817 119 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 P04436 131 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 RBMY1DP0C7P1 496 aaKnown RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 RBMY1A1P0DJD3 496 aaKnown RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 MX1P20591 662 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms