RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CTXN1P60606 82 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 ARF1P84077 181 aaKnown RBP10.23□□□□□ -0.77
CUX1-207ENST00000465461 FLOT2Q14254 428 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 PPA1Q15181 289 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 ACKR1Q16570 336 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 CEACAM16Q2WEN9 425 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 FAM98BQ52LJ0 330 aaKnown RBP10.23□□□□□ -0.77
CUX1-207ENST00000465461 ALG10Q5BKT4 473 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 HMBOX1Q6NT76 420 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 SEZ6L2Q6UXD5 910 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 TMPRSS11FQ6ZWK6 438 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 ZER1Q7Z7L7 766 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 OAFQ86UD1 273 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 CLDN22Q8N7P3 220 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 OR1K1Q8NGR3 316 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 OR6N1Q8NGY5 312 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 ASB10Q8WXI3 467 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 HSD17B8Q92506 261 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 HTRA1Q92743 480 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 PLPPR2Q96GM1 343 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 ZNF347Q96SE7 839 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 LINC00470Q9BZP3 86 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 MAGIXQ9H6Y5 334 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 SLC17A5Q9NRA2 495 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 NPAP1Q9NZP6 1156 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 IL20RAQ9UHF4 553 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 ZNF346Q9UL40 294 aaKnown RBP10.23□□□□□ -0.77
CUX1-207ENST00000465461 HIF3AQ9Y2N7 669 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 U3KQV3 271 aa10.23□□□□□ -0.77
CUX1-207ENST00000465461 CRYBG3Q68DQ2 2970 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 A0A1W2PRG6 482 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 DPRXA6NFQ7 191 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 AQP12BA6NM10 295 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 MCIDASD6RGH6 385 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 TNFRSF11BO00300 401 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 OR10H3O60404 316 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 PTP4A3O75365 173 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 TRMUO75648 421 aaKnown RBP10.22□□□□□ -0.77
CUX1-207ENST00000465461 MAGEA2P43356 314 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 CSNK1A1P48729 337 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 RASSF2P50749 326 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 ZNF83P51522 516 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 SMIM11AP58511 58 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 RPS4XP62701 263 aaKnown RBP10.22□□□□□ -0.77
CUX1-207ENST00000465461 ERVK-25P63136 954 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 TBRG1Q3YBR2 411 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 ZBED5Q49AG3 693 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 TIMM23BQ5SRD1 257 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 ABHD12BQ7Z5M8 362 aaPredicted RBP10.22□□□□□ -0.77
CUX1-207ENST00000465461 AQP12AQ8IXF9 295 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 SYT14Q8NB59 555 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 OR9Q2Q8NGE9 314 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 OR4C15Q8NGM1 316 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 OR6X1Q8NH79 312 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 HDAC2Q92769 488 aaKnown RBP10.22□□□□□ -0.77
CUX1-207ENST00000465461 BCL2L2Q92843 193 aaPredicted RBP10.22□□□□□ -0.77
CUX1-207ENST00000465461 TMEM54Q969K7 222 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 ZNF566Q969W8 418 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 TSPAN32Q96QS1 320 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 CHID1Q9BWS9 393 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 TRIM15Q9C019 465 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 LRMDAQ9H2I8 198 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 NELFAQ9H3P2 528 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 LYVE1Q9Y5Y7 322 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 SLC25A15Q9Y619 301 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 FBN2P35556 2912 aa10.22□□□□□ -0.77
CUX1-207ENST00000465461 CELSR2Q9HCU4 2923 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 DHRS12A0PJE2 317 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 ZNF503-AS2A6NEH8 195 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 UNC119BA6NIH7 251 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 OR6C65A6NJZ3 312 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 RPL36A-HNRNPH2H7BZ11 118 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 M0R1B8 84 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 PGA4P0DJD7 388 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 PGA3P0DJD8 388 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 RAP2AP10114 183 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 ACADSP16219 412 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 RPL4P36578 427 aaKnown RBP10.21□□□□□ -0.77
CUX1-207ENST00000465461 ACVR1BP36896 505 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 SLC9A3P48764 834 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 IST1P53990 364 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 CLRN1P58418 232 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 FXYD6P3P58550 94 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 FMODQ06828 376 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 BEX5Q5H9J7 111 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 ARMC4Q5T2S8 1044 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 OR2T5Q6IEZ7 315 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 OR7E24Q6IFN5 339 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 LRFN4Q6PJG9 635 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 THSD4Q6ZMP0 1018 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 CCDC121Q6ZUS5 278 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 ASRGL1Q7L266 308 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 OR2T29Q8NH02 315 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 NEUROG1Q92886 237 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 SLCO4A1Q96BD0 722 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 MUCL1Q96DR8 90 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 SLC25A44Q96H78 314 aaPredicted RBP10.21□□□□□ -0.77
CUX1-207ENST00000465461 RSRC1Q96IZ7 334 aaKnown RBP10.21□□□□□ -0.77
CUX1-207ENST00000465461 LRR1Q96L50 414 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms