RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 JSRP1Q96MG2 331 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 KCNA7Q96RP8 456 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ATP5SQ99766 215 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 CTRCQ99895 268 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 C7orf50Q9BRJ6 194 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NIPSNAP3BQ9BS92 247 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 FEM1AQ9BSK4 669 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 MED10Q9BTT4 135 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 OSBPL10Q9BXB5 764 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SPZ1Q9BXG8 430 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 UCK2Q9BZX2 261 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NAA50Q9GZZ1 169 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SLITRK2Q9H156 845 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ANKHQ9HCJ1 492 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 UBE2TQ9NPD8 197 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 OR2S2Q9NQN1 319 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TNFRSF19Q9NS68 423 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 CUTCQ9NTM9 273 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 GPATCH2LQ9NWQ4 482 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 BFARQ9NZS9 450 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SENP1Q9P0U3 644 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SCML2Q9UQR0 700 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TSSC4Q9Y5U2 329 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 URGCP-MRPS24S4R325 110 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 RALGAPA1Q6GYQ0 2036 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TRBV9A0A0B4J1U6 114 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 IGHV3-38A0A0C4DH36 116 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 PRAMEF26H0Y7S4 382 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 H3BMQ9 156 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SIRPB1O00241 398 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 TM9SF1O15321 606 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SLC19A2O60779 497 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SC5DO75845 299 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 RBBP9O75884 186 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 VAPBO95292 243 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 C1orf105O95561 183 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 JCHAINP01591 159 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 KLK2P20151 261 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 HTR2CP28335 458 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 HOXA9P31269 272 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SLC26A3P40879 764 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 CX3CR1P49238 355 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 CRISP1P54107 249 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 DSTNP60981 165 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 TRAM2Q15035 370 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 RAB35Q15286 201 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SLC22A6Q4U2R8 563 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SAPCD1Q5SSQ6 148 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 THEM4Q5T1C6 240 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 UTF1Q5T230 341 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ADAMTSL5Q6ZMM2 481 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 DCXRQ7Z4W1 244 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF546Q86UE3 836 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SYS1Q8N2H4 156 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 DHRSXQ8N5I4 330 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 TPRX1Q8N7U7 411 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ATP6V0D2Q8N8Y2 350 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ZSCAN4Q8NAM6 433 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 CSNK1G2-AS1Q8NCQ2 148 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ICA1LQ8NDH6 482 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 PHOSPHO2Q8TCD6 241 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 GPR151Q8TDV0 419 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 AENQ8WTP8 325 aaKnown RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 TFGQ92734 400 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ISOC2Q96AB3 205 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 APH1AQ96BI3 265 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 CCDC127Q96BQ5 260 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ECHDC3Q96DC8 303 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 SDSLQ96GA7 329 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF641Q96N77 438 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 CLCC1Q96S66 551 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 PAPOLGQ9BWT3 736 aaKnown RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 DRC3Q9H069 523 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 C1orf198Q9H425 327 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 RETNQ9HD89 108 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 IMP3Q9NV31 184 aaKnown RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 RCOR3Q9P2K3 495 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 NXT1Q9UKK6 140 aaKnown RBP3.11□□□□□ -1.91
ITGB1-208ENST00000464001 GMPPBQ9Y5P6 360 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 KIF25-AS1Q9Y6Z4 181 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 GON4LQ3T8J9 2241 aa3.11□□□□□ -1.91
ITGB1-208ENST00000464001 A0A1W2PRD5 423 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 FABP12A6NFH5 140 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 MGAT4DA6NG13 374 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 RNASEK-C17orf49H0YIS7 233 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 MKRN2OSH3BPM6 223 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 FCN1O00602 326 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 XRCC2O43543 280 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF354AO60765 605 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-208ENST00000464001 PFKFB2O60825 505 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 NOL4O94818 638 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 ERLIN2O94905 339 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 FARS2O95363 451 aaKnown RBP3.1□□□□□ -1.91
ITGB1-208ENST00000464001 IGHG4P01861 327 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 HLA-HP01893 362 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 ALDOBP05062 364 aa3.1□□□□□ -1.91
ITGB1-208ENST00000464001 DCNP07585 359 aaKnown RBP3.1□□□□□ -1.91
ITGB1-208ENST00000464001 UBTFL1P0CB47 393 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-208ENST00000464001 ABOP16442 354 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms