RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 EMC6Q9BV81 110 aa17.81■□□□□ 0.44
PDLIM4-205ENST00000463615 NANOGQ9H9S0 305 aa17.81■□□□□ 0.44
PDLIM4-205ENST00000463615 YAE1D1Q9NRH1 226 aa17.81■□□□□ 0.44
PDLIM4-205ENST00000463615 MED29Q9NX70 200 aa17.81■□□□□ 0.44
PDLIM4-205ENST00000463615 COL6A5A8TX70 2615 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 TRAPPC13A5PLN9 417 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 FXYD1O00168 92 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 CELA3BP08861 270 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 IDH3GP51553 393 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 CYLC2Q14093 348 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 MDP1Q86V88 176 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 TSPYL5Q86VY4 417 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 CALHM3Q86XJ0 350 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 RBM45Q8IUH3 476 aaKnown RBP17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 WDFY1Q8IWB7 410 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 OR8J3Q8NGG0 315 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 MDFIQ99750 246 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 SH3GL1Q99961 368 aa17.8■□□□□ 0.44
PDLIM4-205ENST00000463615 ZNF726A6NNF4 738 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 VSTM5A8MXK1 200 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 USF1P22415 310 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 PDLIM4P50479 330 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 C10orf53Q8N6V4 93 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 OR6X1Q8NH79 312 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 DOK1Q99704 481 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 TMEM120AQ9BXJ8 343 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 TAS2R5Q9NYW4 299 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 ZNF229Q9UJW7 825 aa17.79■□□□□ 0.44
PDLIM4-205ENST00000463615 LOC390937A0A1W2PQ73 354 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 CPSF4LA6NMK7 179 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 LY6HO94772 140 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 IGF2P01344 180 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 ASAH2BP0C7U1 165 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 ADORA3P0DMS8 318 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 NPR2P20594 1047 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 AHCYP23526 432 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 THBS4P35443 961 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 CARD17Q5XLA6 110 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 TTC33Q6PID6 262 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 ZNF813Q6ZN06 617 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 SLC46A3Q7Z3Q1 461 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 OR6N1Q8NGY5 312 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 TMEM54Q969K7 222 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 LRRC58Q96CX6 371 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 PRSS27Q9BQR3 290 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 ULBP2Q9BZM5 246 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 POLR2J2Q9GZM3 115 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 POLR2J3Q9H1A7 115 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 NANSQ9NR45 359 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 ZNF224Q9NZL3 707 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 POFUT2Q9Y2G5 429 aa17.78■□□□□ 0.44
PDLIM4-205ENST00000463615 TMEM129A0AVI4 362 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 BBIP1A8MTZ0 92 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 VIMP08670 466 aaKnown RBP17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 IFNGR1P15260 489 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 ZNF14P17017 642 aaPredicted RBP17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 NR4A2P43354 598 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 CAMK2DQ13557 499 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 GSG1Q2KHT4 349 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 SLC35D2Q76EJ3 337 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 PIWIL3Q7Z3Z3 882 aaKnown RBP17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 SLC26A7Q8TE54 656 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 FOXB1Q99853 325 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 RAB1BQ9H0U4 201 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 NOX3Q9HBY0 568 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 FBXL3Q9UKT7 428 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 SLC7A7Q9UM01 511 aa17.77■□□□□ 0.44
PDLIM4-205ENST00000463615 SEC14L2O76054 403 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 OR6A2O95222 327 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 CH25HO95992 272 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 HLA-HP01893 362 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 IGHV4-31P0DP07 118 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 TROVE2P10155 538 aaKnown RBP eCLIP17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 ZNF35P13682 527 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 NR4A1P22736 598 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 CSNK1A1P48729 337 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 EVX1P49640 407 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 BIDP55957 195 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 LSM11P83369 360 aaKnown RBP eCLIP17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 NPRL3Q12980 569 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 RABL3Q5HYI8 236 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 CYB5R2Q6BCY4 276 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 ERICH5Q6P6B1 374 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 VHLLQ6RSH7 139 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 VANGL1Q8TAA9 524 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 NEU4Q8WWR8 484 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 PIMREGQ9BSJ6 248 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 SAR1AQ9NR31 198 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 GLTPQ9NZD2 209 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 BAG5Q9UL15 447 aa17.76■□□□□ 0.43
PDLIM4-205ENST00000463615 hCG_2039718K7EN88 272 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 ENTPD5O75356 428 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 RBM34P42696 430 aaKnown RBP17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 CAPZA2P47755 286 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 GZMKP49863 264 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 KLF10Q13118 480 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 DAG1Q14118 895 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 MAPRE2Q15555 327 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 CHRFAM7AQ494W8 412 aa17.75■□□□□ 0.43
PDLIM4-205ENST00000463615 PODNL1Q6PEZ8 512 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms