RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ACVR2AP27037 513 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 ACVR1BP36896 505 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 DAP3P51398 398 aaKnown RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 CDC42P60953 191 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 CD47Q08722 323 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 ITGADQ13349 1161 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 C1DQ13901 141 aaKnown RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 MELKQ14680 651 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 HIST3H3Q16695 136 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 AADACL4Q5VUY2 407 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 FAM205BPQ63HN1 556 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 GTF2IRD2BQ6EKJ0 949 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 CASP12Q6UXS9 341 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 THAP5Q7Z6K1 395 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 GTF2IRD2Q86UP8 949 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 C8orf59Q8N0T1 100 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TMEM123Q8N131 208 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 C9orf106Q8NAJ2 232 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TMEM45BQ96B21 275 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 NMD3Q96D46 503 aaKnown RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 ADAD1Q96M93 576 aaKnown RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 SLC38A2Q96QD8 506 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TRIB1Q96RU8 372 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 EMC6Q9BV81 110 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 FN3KQ9H479 309 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 GLRX2Q9NS18 164 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 UBAP1Q9NZ09 502 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-202ENST00000463060 KLHL9Q9P2J3 617 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 RCE1Q9Y256 329 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 PCDHGB5Q9Y5G0 923 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 COL6A6A6NMZ7 2263 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 POLEQ07864 2286 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 OR6C68A6NDL8 312 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 A6NIZ1 184 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 FIGNL2A6NMB9 653 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 AHCYL1O43865 530 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 SS18L1O75177 396 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 WBP4O75554 376 aaKnown RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 TRMUO75648 421 aaKnown RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 SERPINI2O75830 405 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 YES1P07947 543 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 ACADSP16219 412 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 TIMP3P35625 211 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 BIDP55957 195 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 CLDN17P56750 224 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 RAP1BP61224 184 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 RAP1AP62834 184 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 TOP3AQ13472 1001 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 KRR1Q13601 381 aaKnown RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 CRMP1Q14194 572 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 OCLNQ16625 522 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 TUSC5Q8IXB3 177 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 DEPDC4Q8N2C3 294 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 MARVELD2Q8N4S9 558 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 OR52E2Q8NGJ4 325 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 OR4K13Q8NH42 304 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 APH1BQ8WW43 257 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF775Q96BV0 537 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 SLC25A44Q96H78 314 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 OR2M2Q96R28 347 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 HCAR1Q9BXC0 346 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 PRRG3Q9BZD7 231 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 TP63Q9H3D4 680 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 HINT3Q9NQE9 182 aaKnown RBP12.73□□□□□ -0.37
COL6A1-202ENST00000463060 AASSQ9UDR5 926 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 CFAP46Q8IYW2 2715 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
COL6A1-202ENST00000463060 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 SLC22A23A1A5C7 686 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 PRSS37A4D1T9 235 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 CENPBD1B2RD01 187 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 PRRG2O14669 202 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-202ENST00000463060 PGA4P0DJD7 388 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 PGA3P0DJD8 388 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 NOS3P29474 1203 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF133P52736 654 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-202ENST00000463060 TEKQ02763 1124 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 RBPJQ06330 500 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 CDK5R2Q13319 367 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms