RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 BRWD1Q9NSI6 2320 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 MFSD2BA6NFX1 497 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 B3GALT2O43825 422 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 IFNGR1P15260 489 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ZP3P21754 424 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ACTR1BP42025 376 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ACTR1AP61163 376 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 DYRK1AQ13627 763 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TRAM1Q15629 374 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 RGS7BPQ6MZT1 257 aaPredicted RBP11.34□□□□□ -0.59
HDAC4-208ENST00000463007 PWWP2BQ6NUJ5 590 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 KIRREL2Q6UWL6 708 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 OR6N2Q8NGY6 317 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TMEM106AQ96A25 262 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 IFT46Q9NQC8 304 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 KLF8O95600 359 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 APBB3O95704 486 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 CD3DP04234 171 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 AQP2P41181 271 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 ACTC1P68032 377 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 ACTA1P68133 377 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 LTBQ06643 244 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF273Q14593 569 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 PRRT3Q5FWE3 981 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 LIPNQ5VXI9 398 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 OR10K2Q6IF99 312 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 ENPP7Q6UWV6 458 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 SEZ6L2Q6UXD5 910 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 STAC2Q6ZMT1 411 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 OR52R1Q8NGF1 315 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 OR10K1Q8NGX5 313 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 FAM174AQ8TBP5 190 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 FOXJ3Q9UPW0 622 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 KLHDC2Q9Y2U9 406 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 AUP1Q9Y679 476 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 EML5Q05BV3 1969 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 CABIN1Q9Y6J0 2220 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 A0A1B0GUH1 482 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 AIPO00170 330 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 TNFRSF10CO14798 259 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 CTNSO60931 367 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 PLGP00747 810 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 CTSBP07858 339 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 ADRA2CP18825 462 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 C4BPBP20851 252 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 RAP2BP61225 183 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 PLAURQ03405 335 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 GK2Q14410 553 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 KIR2DS3Q14952 304 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 RPL22L1Q6P5R6 122 aaKnown RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 DPY19L4Q7Z388 723 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 HDDC2Q7Z4H3 204 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 OR52H1Q8NGJ2 320 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 TSEN15Q8WW01 171 aaKnown RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-208ENST00000463007 LRRC46Q96FV0 321 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF75AQ96N20 296 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 PTTG3PQ9NZH4 202 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
HDAC4-208ENST00000463007 F5H5P2 479 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 DCTN6O00399 190 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TGM6O95932 706 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 OR2T7P0C7T2 308 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 SPI1P17947 270 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 RPS4Y1P22090 263 aaKnown RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 SLC2A5P22732 501 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 IL32P24001 234 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 DPP4P27487 766 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ARHGAP11AQ6P4F7 1023 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 OR2T27Q8NH04 317 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 WDR92Q96MX6 357 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF471Q9BX82 626 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 EVA1AQ9H8M9 152 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 AKAP7Q9P0M2 348 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF281Q9Y2X9 895 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 SLC6A5Q9Y345 797 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TRAV1-2A0A0B4J238 106 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 C11orf98E9PRG8 122 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 F12P00748 615 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 GALP22466 123 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 CCKBRP32239 447 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 MAP3K8P41279 467 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TFF2Q03403 129 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 CD163Q86VB7 1156 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 OR6V1Q8N148 313 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ARHGEF39Q8N4T4 335 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 OR5AK2Q8NH90 309 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 NR4A3Q92570 626 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ALG12Q9BV10 488 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms