RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 APOBEC3AP31941 199 aaPredicted RBP8.85□□□□□ -0.99
SF3A3-204ENST00000462258 OR1E2P47887 323 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 CSNK1A1P48729 337 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 IDH3GP51553 393 aaPredicted RBP8.85□□□□□ -0.99
SF3A3-204ENST00000462258 UGT2B15P54855 530 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 BIDP55957 195 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 NPRL3Q12980 569 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 MELKQ14680 651 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 KRTAP21-3Q3LHN1 58 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 CYBRD1Q53TN4 286 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 DNM1P46Q6ZS02 220 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 SLC46A3Q7Z3Q1 461 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 MYPOPQ86VE0 399 aaPredicted RBP8.85□□□□□ -0.99
SF3A3-204ENST00000462258 MICU2Q8IYU8 434 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 FAM169BQ8N8A8 192 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 MAPK1IP1LQ8NDC0 245 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 OR6N1Q8NGY5 312 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 PFN4Q8NHR9 129 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 RP9Q8TA86 221 aaKnown RBP8.85□□□□□ -0.99
SF3A3-204ENST00000462258 TMEM255BQ8WV15 326 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 FBXO17Q96EF6 278 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 TXNDC15Q96J42 360 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 LRR1Q96L50 414 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 CA10Q9NS85 328 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 CMTM6Q9NX76 183 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 AP3M1Q9Y2T2 418 aa8.85□□□□□ -0.99
SF3A3-204ENST00000462258 HIVEP2P31629 2446 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 PDE5AO76074 875 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 MT-ND1P03886 318 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 ASAH2BP0C7U1 165 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 BMP4P12644 408 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 COX4I1P13073 169 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 B4GALT1P15291 398 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 CBR1P16152 277 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 CALCRP30988 508 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 KDELR2P33947 212 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 ARR3P36575 388 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 RBM34P42696 430 aaKnown RBP8.84□□□□□ -0.99
SF3A3-204ENST00000462258 NUDT2P50583 147 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 SLC7A2P52569 658 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 SNRPD2P62316 118 aaKnown RBP8.84□□□□□ -0.99
SF3A3-204ENST00000462258 CHRNB3Q05901 458 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 PIN1Q13526 163 aaPredicted RBP8.84□□□□□ -0.99
SF3A3-204ENST00000462258 RAB35Q15286 201 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 CLEC2AQ6UVW9 174 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 NHLRC1Q6VVB1 395 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 ZNF813Q6ZN06 617 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 SLC35D2Q76EJ3 337 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 SPATA21Q7Z572 469 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 MDP1Q86V88 176 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 NKAIN4Q8IVV8 208 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 CCDC36Q8IYA8 594 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 LRRC17Q8N6Y2 441 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 TMEM239Q8WW34 195 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 NANOS1Q8WY41 292 aaKnown RBP8.84□□□□□ -0.99
SF3A3-204ENST00000462258 HTRA1Q92743 480 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 TPD52L3Q96J77 140 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 PRRC1Q96M27 445 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 FOXB1Q99853 325 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 REG4Q9BYZ8 158 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 MEPEQ9NQ76 525 aaPredicted RBP8.84□□□□□ -0.99
SF3A3-204ENST00000462258 GMPR2Q9P2T1 348 aaKnown RBP8.84□□□□□ -0.99
SF3A3-204ENST00000462258 RIMS3Q9UJD0 308 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 POFUT2Q9Y2G5 429 aa8.84□□□□□ -0.99
SF3A3-204ENST00000462258 CSPG4Q6UVK1 2322 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 IGHV2OR16-5A0A0B4J2B6 119 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 NME4O00746 187 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 ATP8B1O43520 1251 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 PIP5K1CO60331 668 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 OR7A10O76100 309 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 IGF2P01344 180 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 HLA-HP01893 362 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 HIST1H2ABP04908 130 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 THRBP10828 461 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 PCSK6P29122 969 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 LIPEQ05469 1076 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 RPL18Q07020 188 aaKnown RBP8.83□□□□□ -1
SF3A3-204ENST00000462258 KRTAP1-1Q07627 177 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 ZP4Q12836 540 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 GSG1Q2KHT4 349 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 VHLLQ6RSH7 139 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 HIST3H2AQ7L7L0 130 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 ZNF627Q7L945 461 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 TREML1Q86YW5 311 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 SLC15A3Q8IY34 581 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 ZNF525Q8N782 197 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 NOXO1Q8NFA2 376 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 NUP37Q8NFH4 326 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 OR4F15Q8NGB8 312 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 OR6X1Q8NH79 312 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 LZICQ8WZA0 190 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 HIST1H2ACQ93077 130 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 TMEM54Q969K7 222 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 ZNF566Q969W8 418 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 SGTBQ96EQ0 304 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 FAM107BQ9H098 131 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 NSRP1Q9H0G5 558 aaKnown RBP8.83□□□□□ -1
SF3A3-204ENST00000462258 NOX3Q9HBY0 568 aa8.83□□□□□ -1
SF3A3-204ENST00000462258 C20orf141Q9NUB4 165 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms