RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ANP32EQ9BTT0 268 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 NAT10Q9H0A0 1025 aaKnown RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 ZNF696Q9H7X3 374 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 FBXO6Q9NRD1 293 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 ZFP57Q9NU63 452 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 TEX10Q9NXF1 929 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 BFARQ9NZS9 450 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 ARMCX1Q9P291 453 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 IKZF3Q9UKT9 509 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 ZNF490Q9ULM2 529 aaPredicted RBP4.13□□□□□ -1.75
COPS3-204ENST00000462236 TFR2Q9UP52 801 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 LRP12Q9Y561 859 aa4.13□□□□□ -1.75
COPS3-204ENST00000462236 A0A0B4J293 547 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 TMEM89A2RUT3 159 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 SHISA9B4DS77 424 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CCDC188H7C350 402 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 AP3B1O00203 1094 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ICOSLGO75144 302 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CBR3O75828 277 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 INHBAP08476 426 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 C1GALT1C1LP0DN25 315 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 IGHV4-38-2P0DP08 117 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 TPSB2P20231 275 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CD22P20273 847 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ZNF10P21506 573 aaPredicted RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 ATP5A1P25705 553 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 SRD5A2P31213 254 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 MAGEA6P43360 314 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 RGS4P49798 205 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ZNF41P51814 821 aaPredicted RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 SUCLG1P53597 346 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 PLA2G16P53816 162 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CDKN2DP55273 166 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 HERVK_113P63132 956 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ERVK-8P63133 956 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 IRX1P78414 480 aaPredicted RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 CDKL1Q00532 357 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CDK16Q00536 496 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 SRYQ05066 204 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 SQLEQ14534 574 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 RBBP5Q15291 538 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 TPSAB1Q15661 275 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 VWC2Q2TAL6 325 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ZNF470Q6ECI4 717 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ADNP2Q6IQ32 1131 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 TRIM40Q6P9F5 258 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 TMIGD1Q6UXZ0 262 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 IL17RELQ6ZVW7 336 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ZNF554Q86TJ5 538 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 THOC6Q86W42 341 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 OR4N5Q8IXE1 308 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 LMNTD2Q8IXW0 634 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CNEP1R1Q8N9A8 125 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ACOT4Q8N9L9 421 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 OR2T12Q8NG77 320 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 C10orf105Q8TEF2 133 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ANKRD7Q92527 254 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 PROX1Q92786 737 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 PPWD1Q96BP3 646 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 NXNL1Q96CM4 212 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 WDR34Q96EX3 536 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 PDLIM5Q96HC4 596 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 TSNARE1Q96NA8 513 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 UHRF2Q96PU4 802 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 RAB3IPQ96QF0 476 aaPredicted RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 NODALQ96S42 347 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 EPYCQ99645 322 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ERVK-6Q9BXR3 956 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 FRMD8P1Q9BZ68 369 aaPredicted RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 EHD1Q9H4M9 534 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 CNOT10Q9H9A5 744 aaKnown RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.12□□□□□ -1.75
COPS3-204ENST00000462236 IFNKQ9P0W0 207 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 PAK5Q9P286 719 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 GIMAP2Q9UG22 337 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 FBXO5Q9UKT4 447 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 SLC7A7Q9UM01 511 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ICAM5Q9UMF0 924 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 FAF1Q9UNN5 650 aaPredicted RBP4.12□□□□□ -1.75
COPS3-204ENST00000462236 ERVK-19Q9WJR5 959 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 SLC22A14Q9Y267 594 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 ZNF175Q9Y473 711 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 RNF115Q9Y4L5 304 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 TENM3Q9P273 2699 aa4.12□□□□□ -1.75
COPS3-204ENST00000462236 C2orf92A0A1B0GVN3 265 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 A0A1W2PP18 115 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 A0A1W2PPM1 405 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 SLC22A20A6NK97 555 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 E9PI62 339 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 SLCO1B7G3V0H7 640 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 H0YC42 278 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 CDC7O00311 574 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 TCF21O43680 179 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 GCM2O75603 506 aaPredicted RBP4.11□□□□□ -1.75
COPS3-204ENST00000462236 AQP8O94778 261 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 VENTXO95231 258 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 IFNB1P01574 187 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 IGLV2-11P01706 119 aa4.11□□□□□ -1.75
COPS3-204ENST00000462236 HIST1H2AGP0C0S8 130 aaPredicted RBP4.11□□□□□ -1.75
COPS3-204ENST00000462236 CT62P0C5K7 136 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms