RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ADAD1Q96M93 576 aaKnown RBP16.8■□□□□ 0.28
HPS3-204ENST00000462030 ZNF337Q9Y3M9 751 aa16.8■□□□□ 0.28
HPS3-204ENST00000462030 POM121BA6NF01 834 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 TNFSF14O43557 240 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 ABHD16AO95870 558 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 EGFP01133 1207 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 RPS27P42677 84 aaKnown RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 ADPRHP54922 357 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 KIR2DS3Q14952 304 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 TSSK4Q6SA08 328 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 ZNF550Q7Z398 422 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 MRPS24Q96EL2 167 aaKnown RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 SCARF2Q96GP6 870 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 ZFYVE21Q9BQ24 234 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 GLS2Q9UI32 602 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 BLOC1S5-TXNDC5H3BN57 136 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 DCTN6O00399 190 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 SDC3O75056 442 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 KDM4BO94953 1096 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 MAPK3P27361 379 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 AQP2P41181 271 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 LSSP48449 732 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 PGDP52209 483 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 RPS4XP62701 263 aaKnown RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 C11orf88Q6PI97 169 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 SLC16A9Q7RTY1 509 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 OR51D1Q8NGF3 324 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 OR6N1Q8NGY5 312 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 HOXB13Q92826 284 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 DVL3Q92997 716 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 RERGQ96A58 199 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 EVA1AQ9H8M9 152 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 ACTR10Q9NZ32 417 aa16.79■□□□□ 0.28
HPS3-204ENST00000462030 ARHGEF17Q96PE2 2063 aaPredicted RBP16.79■□□□□ 0.28
HPS3-204ENST00000462030 OR6C74A6NCV1 312 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 GGT3PA6NGU5 568 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 TVP23AA6NH52 213 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 D6RAR5 112 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 OR10H2O60403 315 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 GTF2F2P13984 249 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 MPGP29372 298 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 ENPP7Q6UWV6 458 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 LRRN1Q6UXK5 716 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 ZNF227Q86WZ6 799 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 TMEM106AQ96A25 262 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 MFFQ9GZY8 342 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 STEAP1Q9UHE8 339 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 CACNA1CQ13936 2221 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 H7C1C5 153 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 CTAG2O75638 210 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 HPP00738 406 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 APOC3P02656 99 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 CSF1P09603 554 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 TACSTD2P09758 323 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 S1PR1P21453 382 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 ACTR1BP42025 376 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 ACTR1AP61163 376 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 LCN6P62502 163 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 ETFDHQ16134 617 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 OR8S1Q8NH09 359 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 NKX3-1Q99801 234 aaPredicted RBP16.78■□□□□ 0.28
HPS3-204ENST00000462030 SRA1Q9HD15 236 aaKnown RBP16.78■□□□□ 0.28
HPS3-204ENST00000462030 IKZF2Q9UKS7 526 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 HRH3Q9Y5N1 445 aa16.78■□□□□ 0.28
HPS3-204ENST00000462030 C2orf16Q68DN1 1984 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 H0Y8X5 98 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 AQP8O94778 261 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 C4orf46Q504U0 113 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 C1orf53Q5VUE5 145 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 NKAIN2Q5VXU1 208 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 NPSR1Q6W5P4 371 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 JAZF1Q86VZ6 243 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 EXD3Q8N9H8 876 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 TSACCQ96A04 125 aaPredicted RBP16.77■□□□□ 0.28
HPS3-204ENST00000462030 C3orf49Q96BT1 292 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 SPACA7Q96KW9 195 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 LMF2Q9BU23 707 aaKnown RBP16.77■□□□□ 0.28
HPS3-204ENST00000462030 LRIT1Q9P2V4 623 aa16.77■□□□□ 0.28
HPS3-204ENST00000462030 IGKV1D-42A0A075B6H8 117 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 OR4C45A6NMZ5 311 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 FOXS1O43638 330 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 RASGRP1O95267 797 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 CD3DP04234 171 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 ANKRD16Q6P6B7 361 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 C17orf107Q6ZR85 190 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 EIF4E3Q8N5X7 224 aaKnown RBP16.77■□□□□ 0.27
HPS3-204ENST00000462030 LSM14AQ8ND56 463 aaKnown RBP16.77■□□□□ 0.27
HPS3-204ENST00000462030 RCBTB1Q8NDN9 531 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 OR6K3Q8NGY3 331 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 DUSP19Q8WTR2 217 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 APMAPQ9HDC9 416 aa16.77■□□□□ 0.27
HPS3-204ENST00000462030 TRAV18A0A075B6X5 111 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TBC1D3DA0A087WVF3 549 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TBC1D3IA0A087WXS9 549 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TBC1D3LB9A6J9 549 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 RDH16O75452 317 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 CSTAP01040 98 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 FBXO45P0C2W1 286 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms