RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 FAM220AQ7Z4H9 259 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 LRRC28Q86X40 367 aaPredicted RBP18.24■□□□□ 0.51
CCM2-203ENST00000461377 TMEM105Q8N8V8 129 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 PMEPA1Q969W9 287 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 OR14A2Q96R54 314 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 INTS14Q96SY0 518 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 ZCCHC4Q9H5U6 513 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 GPN3Q9UHW5 284 aaPredicted RBP18.24■□□□□ 0.51
CCM2-203ENST00000461377 ZNF281Q9Y2X9 895 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 IGLV3-32A0A0A0MS00 114 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 DKK1O94907 266 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 CCL4P13236 92 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 MSX1P28360 303 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 FOXF1Q12946 379 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 MRPL28Q13084 256 aaKnown RBP18.24■□□□□ 0.51
CCM2-203ENST00000461377 Q8N402 240 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 IL17RDQ8NFM7 739 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 OR6N2Q8NGY6 317 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 HAVCR2Q8TDQ0 301 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 ELP5Q8TE02 316 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 NEDD4LQ96PU5 975 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 CYSLTR2Q9NS75 346 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 PPP4R1LQ9P1A2 415 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 LAMP5Q9UJQ1 280 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 B9D1Q9UPM9 204 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 PCNX3Q9H6A9 2034 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 A0A1W2PPK0 400 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 SLC2A2P11168 524 aaPredicted RBP18.23■□□□□ 0.51
CCM2-203ENST00000461377 ALOX5APP20292 161 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 CCKBRP32239 447 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 NTRK2Q16620 822 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 CEP78Q5JTW2 689 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 IL20RBQ6UXL0 311 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 DTWD2Q8NBA8 298 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 OR10G3Q8NGC4 313 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 MFSD8Q8NHS3 518 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 CHAC2Q8WUX2 184 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 DEFB126Q9BYW3 111 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 B3GAT2Q9NPZ5 323 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 B3GALT1Q9Y5Z6 326 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 VCANP13611 3396 aa18.23■□□□□ 0.51
CCM2-203ENST00000461377 LINC00854A0A1B0GVQ3 168 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 NOTOA8MTQ0 251 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 ZNF208O43345 1280 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 GPANK1O95872 356 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 KRT8P05787 483 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 KLK3P07288 261 aaPredicted RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 IL11P20809 199 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 INSM1Q01101 510 aaPredicted RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 ZP4Q12836 540 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 MFSD13AQ14CX5 517 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 YIF1BQ5BJH7 314 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 SLC25A53Q5H9E4 307 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 LIPNQ5VXI9 398 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 YIPF7Q8N8F6 280 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 RGP1Q92546 391 aaPredicted RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 ATOH1Q92858 354 aaPredicted RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 HPS1Q92902 700 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 MAP6Q96JE9 813 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 SLC22A4Q9H015 551 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 C11orf54Q9H0W9 315 aaPredicted RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 EXTL2Q9UBQ6 330 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 VDAC3Q9Y277 283 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 WIF1Q9Y5W5 379 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 TMEM14AQ9Y6G1 99 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 MYO15AQ9UKN7 3530 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 PLA2G10O15496 165 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 FLRT2O43155 660 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 ZFPL1O95159 310 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 EIF4EP06730 217 aaKnown RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 UMODP07911 640 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 EGR3Q06889 387 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 HSD17B12Q53GQ0 312 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 DPY19L4Q7Z388 723 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 SCAIQ8N9R8 606 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 TRMT10AQ8TBZ6 339 aaKnown RBP18.22■□□□□ 0.51
CCM2-203ENST00000461377 HSD17B8Q92506 261 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 MR1Q95460 341 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 RELTQ969Z4 430 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 ARL5BQ96KC2 179 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 RASL10BQ96S79 203 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 SMOC1Q9H4F8 434 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 METTL7AQ9H8H3 244 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 SDHAF3Q9NRP4 125 aa18.22■□□□□ 0.51
CCM2-203ENST00000461377 TECTAO75443 2155 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 CPAMD8Q8IZJ3 1885 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 IGLV1-36A0A0B4J1U3 117 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 ZNF879B4DU55 563 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 PHYHO14832 338 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 RPP14O95059 124 aaKnown RBP18.21■□□□□ 0.51
CCM2-203ENST00000461377 PSKH1P11801 424 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 NPR2P20594 1047 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 ALKBH1Q13686 389 aaKnown RBP18.21■□□□□ 0.51
CCM2-203ENST00000461377 BTBD16Q32M84 506 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 TRIQKQ629K1 86 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 SAMD12Q8N8I0 201 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 DDIT4LQ96D03 193 aa18.21■□□□□ 0.51
CCM2-203ENST00000461377 SPACA9Q96E40 222 aaPredicted RBP18.21■□□□□ 0.51
CCM2-203ENST00000461377 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.21■□□□□ 0.511e-8■■■■□ 21.4
CCM2-203ENST00000461377 NOX4Q9NPH5 578 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms