RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMEM72A0PK05 275 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 J3QLI3 93 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 FXYD1O00168 92 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 AKR7A3O95154 331 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 PPIBP23284 216 aaKnown RBP14.8□□□□□ -0.04
TOP3A-202ENST00000461127 COL8A2P25067 703 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 LMO4P61968 165 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 NPRL3Q12980 569 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 MAPK14Q16539 360 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 GTDC1Q4AE62 458 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 ATAD3BQ5T9A4 648 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 KRT80Q6KB66 452 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 TMEM99Q8N816 258 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 SLC35A5Q9BS91 424 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 SERHL2Q9H4I8 314 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 CRLF2Q9HC73 371 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 SPAG4Q9NPE6 437 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 ZNF275Q9NSD4 429 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-202ENST00000461127 SLC6A13Q9NSD5 602 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 ADA2Q9NZK5 511 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 VAPAQ9P0L0 249 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 OSGIN1Q9UJX0 560 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 WDR45Q9Y484 360 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 PPIAL4AQ9Y536 164 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 CORINQ9Y5Q5 1042 aa14.8□□□□□ -0.04
TOP3A-202ENST00000461127 AQP7P3A6NL99 342 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 EVPLLA8MZ36 301 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 WNT9BO14905 357 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 DNAJC8O75937 253 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-202ENST00000461127 MPZL1O95297 269 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 KRT75O95678 551 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 AGR2O95994 175 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 HPXP02790 462 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 TCN1P20061 433 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-202ENST00000461127 SLC6A2P23975 617 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 NOTCH1P46531 2555 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 SELENOPP49908 381 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 SLC7A2P52569 658 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 KCNJ10P78508 379 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 MRPS11P82912 194 aaKnown RBP14.79□□□□□ -0.04
TOP3A-202ENST00000461127 CEACAM7Q14002 265 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 OR7A5Q15622 319 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 RUNDC3AQ59EK9 446 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 NANOGP8Q6NSW7 305 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 OLIG3Q7RTU3 272 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 MYPOPQ86VE0 399 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-202ENST00000461127 MSRB3Q8IXL7 192 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 ARHGAP24Q8N264 748 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 OR8J3Q8NGG0 315 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 RAB39BQ96DA2 213 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 TMPRSS13Q9BYE2 586 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 RAD21L1Q9H4I0 556 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 UNKLQ9H9P5 680 aaKnown RBP14.79□□□□□ -0.04
TOP3A-202ENST00000461127 NANOGQ9H9S0 305 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 NOX3Q9HBY0 568 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 POLE3Q9NRF9 147 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-202ENST00000461127 MED29Q9NX70 200 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 SLC25A37Q9NYZ2 338 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 CORO2BQ9UQ03 480 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 AP3M1Q9Y2T2 418 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 NOX1Q9Y5S8 564 aa14.79□□□□□ -0.04
TOP3A-202ENST00000461127 TRBV5-3A0A0A0MS03 114 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 POM121CA8CG34 1229 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 CLIC1O00299 241 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 BCAS1O75363 584 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 VAMP5O95183 116 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 UQCRBP14927 111 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 HOXB9P17482 250 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 ADRA2CP18825 462 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 TACR3P29371 465 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 MTPNP58546 118 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 ROR2Q01974 943 aaKnown RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 RABL3Q5HYI8 236 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 DCAF12L2Q5VW00 463 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 C8orf82Q6P1X6 216 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 NIPAL3Q6P499 406 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 C6orf120Q7Z4R8 191 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 CCDC36Q8IYA8 594 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 CLEC4FQ8N1N0 589 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 SLC35G5Q96KT7 338 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 CDRT15Q96T59 188 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 CPPED1Q9BRF8 314 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 THTPAQ9BU02 230 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 TAPBPLQ9BX59 468 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 MRPL37Q9BZE1 423 aaKnown RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 LINC00470Q9BZP3 86 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 NELFAQ9H3P2 528 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 ZMAT3Q9HA38 289 aaKnown RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 TPT1P8Q9HAU6 139 aa14.78□□□□□ -0.04
TOP3A-202ENST00000461127 PRPF19Q9UMS4 504 aaKnown RBP14.78□□□□□ -0.04
TOP3A-202ENST00000461127 PRKDCP78527 4128 aaKnown RBP14.77□□□□□ -0.04
TOP3A-202ENST00000461127 ZC3H12DA2A288 527 aaKnown RBP14.77□□□□□ -0.05
TOP3A-202ENST00000461127 LIPT2A6NK58 231 aa14.77□□□□□ -0.05
TOP3A-202ENST00000461127 GSC2O15499 205 aa14.77□□□□□ -0.05
TOP3A-202ENST00000461127 UPK3AO75631 287 aa14.77□□□□□ -0.05
TOP3A-202ENST00000461127 PRSS23O95084 383 aa14.77□□□□□ -0.05
TOP3A-202ENST00000461127 GUSBP08236 651 aa14.77□□□□□ -0.05
TOP3A-202ENST00000461127 NR4A1P22736 598 aa14.77□□□□□ -0.05
TOP3A-202ENST00000461127 CAPZA2P47755 286 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms