RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 B3GAT1Q9P2W7 334 aa12.91□□□□□ -0.34
NCK1-202ENST00000460960 CDC42EP3Q9UKI2 254 aa12.91□□□□□ -0.34
NCK1-202ENST00000460960 IGHV4-30-2A0A087WSY4 118 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 IGKV3D-15A0A087WSY6 115 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 TCRBV3S1A0A5B6 114 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 MS4A18H0YCH9 400 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 DNPH1O43598 174 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 H1F0P07305 194 aaKnown RBP12.9□□□□□ -0.34
NCK1-202ENST00000460960 THRBP10828 461 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 HLA-DOBP13765 273 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 MAKP20794 623 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 RBM34P42696 430 aaKnown RBP12.9□□□□□ -0.34
NCK1-202ENST00000460960 NUDT6P53370 316 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 SPIBQ01892 262 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 CCNIQ14094 377 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
NCK1-202ENST00000460960 STK11Q15831 433 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 PGGHGQ32M88 737 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 MS4A18Q3C1V0 323 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 KRTAP24-1Q3LI83 254 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 C6orf52Q5T4I8 152 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 GTF2IRD2BQ6EKJ0 949 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 GTF2IRD2Q86UP8 949 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 SPATA24Q86W54 205 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 NRMQ8IXM6 262 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 SLC43A2Q8N370 569 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 KISS1RQ969F8 398 aaPredicted RBP12.9□□□□□ -0.34
NCK1-202ENST00000460960 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 LRGUKQ96M69 825 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 ZNF385AQ96PM9 386 aaKnown RBP12.9□□□□□ -0.34
NCK1-202ENST00000460960 HDHD5Q9BXW7 423 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 KLHL9Q9P2J3 617 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 CADP27708 2225 aa12.9□□□□□ -0.34
NCK1-202ENST00000460960 A0A1W2PRQ8 180 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 DHRS12A0PJE2 317 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 AQP12BA6NM10 295 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 EIF1BO60739 113 aaKnown RBP12.89□□□□□ -0.35
NCK1-202ENST00000460960 ADAP00813 363 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 YES1P07947 543 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 RRM2P31350 389 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 SLC16A1P53985 500 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 CDH11P55287 796 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 LGALS3BPQ08380 585 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 DGCR6Q14129 220 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 FGD3Q5JSP0 725 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 SFRP5Q5T4F7 317 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
NCK1-202ENST00000460960 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 CYP4Z1Q86W10 505 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 EPHX4Q8IUS5 362 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 AQP12AQ8IXF9 295 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 OR9K2Q8NGE7 335 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 PIGXQ8TBF5 258 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 EPYCQ99645 322 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
NCK1-202ENST00000460960 TRAF4Q9BUZ4 470 aaPredicted RBP12.89□□□□□ -0.35
NCK1-202ENST00000460960 MAGIXQ9H6Y5 334 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 FAIMQ9NVQ4 179 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 CISD1Q9NZ45 108 aaKnown RBP12.89□□□□□ -0.35
NCK1-202ENST00000460960 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 AURKCQ9UQB9 309 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 MED31Q9Y3C7 131 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 FAM32AQ9Y421 112 aaKnown RBP12.89□□□□□ -0.35
NCK1-202ENST00000460960 FLVCR1Q9Y5Y0 555 aa12.89□□□□□ -0.35
NCK1-202ENST00000460960 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.35
NCK1-202ENST00000460960 ZNF724A8MTY0 619 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 PLPP3O14495 311 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 OR2T1O43869 369 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 OR7A10O76100 309 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 IGHV3-9P01782 118 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 ASAH2BP0C7U1 165 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 IFI30P13284 250 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 GPR4P46093 362 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 SRSF2Q01130 221 aaKnown RBP12.88□□□□□ -0.35
NCK1-202ENST00000460960 FHL1Q13642 323 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 LAPTM4AQ15012 233 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 PDK3Q15120 406 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 TMEM249Q2WGJ8 235 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 CLEC2AQ6UVW9 174 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 TFAP2EQ6VUC0 442 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 ZNF730Q6ZMV8 503 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 H1FNTQ75WM6 255 aaPredicted RBP12.88□□□□□ -0.35
NCK1-202ENST00000460960 GABRG1Q8N1C3 465 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 OR6S1Q8NH40 331 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 ACOT11Q8WXI4 607 aaPredicted RBP12.88□□□□□ -0.35
NCK1-202ENST00000460960 SGTBQ96EQ0 304 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 GPA33Q99795 319 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 CHID1Q9BWS9 393 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 MRPL39Q9NYK5 338 aaKnown RBP12.88□□□□□ -0.35
NCK1-202ENST00000460960 TAS2R5Q9NYW4 299 aa12.88□□□□□ -0.35
NCK1-202ENST00000460960 SH3PXD2BA1X283 911 aa12.87□□□□□ -0.35
NCK1-202ENST00000460960 DPRXA6NFQ7 191 aa12.87□□□□□ -0.35
NCK1-202ENST00000460960 C11orf98E9PRG8 122 aa12.87□□□□□ -0.35
NCK1-202ENST00000460960 TRAF3IP2O43734 574 aaPredicted RBP12.87□□□□□ -0.35
NCK1-202ENST00000460960 GADD45GO95257 159 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms