RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 RTCAO00442 366 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SYNGR3O43761 229 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 GPR137BO60478 399 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TSPAN2O60636 221 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 EEDO75530 441 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 RP2O75695 350 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 VAPBO95292 243 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TBX6O95947 436 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 IGHV3-9P01782 118 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 IGFBP1P08833 259 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 H2AFZP0C0S5 128 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 CT62P0C5K7 136 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 C1GALT1C1LP0DN25 315 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 IGHV4-38-2P0DP08 117 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SKILP12757 684 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 IGLL1P15814 213 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 OGNP20774 298 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 EDNRAP25101 427 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 PIK3R1P27986 724 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SFTPDP35247 375 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 PNLIPRP2P54317 469 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 F2RL1P55085 397 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 EIF3EP60228 445 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TGFBR3Q03167 851 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 EMX1Q04741 257 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 BST1Q10588 318 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 ZNF154Q13106 437 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 RASA2Q15283 850 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 DEFB112Q30KQ8 113 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TMEM35AQ53FP2 167 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 AVPI1Q5T686 147 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 UGT3A1Q6NUS8 523 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 Q6ZSV7 163 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 H2AFVQ71UI9 128 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 CDK20Q8IZL9 346 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 C17orf53Q8N3J3 647 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 GTPBP8Q8N3Z3 284 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 WDR31Q8NA23 367 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 ZSCAN4Q8NAM6 433 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SLC16A11Q8NCK7 471 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 NUP37Q8NFH4 326 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 OR4F17Q8NGA8 305 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 OSR1Q8TAX0 266 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 ACTL9Q8TC94 416 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 CD200R1Q8TD46 325 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 CTNNBL1Q8WYA6 563 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 YIPF5Q969M3 257 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 APH1AQ96BI3 265 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TRIM44Q96DX7 344 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TIMD4Q96H15 378 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 FAM71F1Q96KD3 344 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SLC38A2Q96QD8 506 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 OR4F4Q96R69 305 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 GPR21Q99679 349 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 GAL3ST1Q99999 423 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 PSD2Q9BQI7 771 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SRXN1Q9BYN0 137 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 C16orf95Q9H693 158 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 NT5DC2Q9H857 520 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 PNRC2Q9NPJ4 139 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 CHRAC1Q9NRG0 131 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 PAPOLBQ9NRJ5 636 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 TREX1Q9NSU2 369 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 GIMAP4Q9NUV9 329 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 MALT1Q9UDY8 824 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 PRODH2Q9UF12 536 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 ABCG2Q9UNQ0 655 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 SLC22A14Q9Y267 594 aa3.36□□□□□ -1.87
ECHDC1-211ENST00000460558 NUP214P35658 2090 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 A0A096LPK6 155 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 TRAV40A0A0B4J280 105 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 IGHV1-18A0A0C4DH31 117 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 TMEM129A0AVI4 362 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 GJE1A6NN92 205 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 CLDN25C9JDP6 229 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 C9JVG2 144 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 GOLGA8KD6RF30 607 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 FOXE1O00358 373 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 CLGNO14967 610 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 SPOPO43791 374 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 GMFGO60234 142 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 IGHMP01871 453 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 IFNW1P05000 195 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 MELTFP08582 738 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 PPIAL4GP0DN37 164 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 PCNAP12004 261 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 ZNF12P17014 697 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 TCN1P20061 433 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 S1PR1P21453 382 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 PAX7P23759 505 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 DCTDP32321 178 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 SLC1A1P43005 524 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 SLC15A1P46059 708 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 EVX1P49640 407 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 ZNF41P51814 821 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 RAP1GDS1P52306 607 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 NAAAQ02083 359 aa3.35□□□□□ -1.87
ECHDC1-211ENST00000460558 C17orf67Q0P5P2 114 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms