RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 BIDP55957 195 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 RAB35Q15286 201 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 SWI5Q1ZZU3 235 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 MST1LQ2TV78 715 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 DEF8Q6ZN54 512 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 CCDC36Q8IYA8 594 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 OR2T12Q8NG77 320 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 ULBP2Q9BZM5 246 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 MEPEQ9NQ76 525 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-203ENST00000460264 CA10Q9NS85 328 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 TAS2R5Q9NYW4 299 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 SONP18583 2426 aaKnown RBP16.43■□□□□ 0.22
COL5A1-203ENST00000460264 IGHV4-30-2A0A087WSY4 118 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 SHOX2O60902 331 aaPredicted RBP16.43■□□□□ 0.22
COL5A1-203ENST00000460264 IFNA14P01570 189 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 ASAH2BP0C7U1 165 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 BMP4P12644 408 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 PCSK6P29122 969 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 CAPZA2P47755 286 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 TAS2R41P59536 307 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 ZP4Q12836 540 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 NPRL3Q12980 569 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 LRRC23Q53EV4 343 aaPredicted RBP16.43■□□□□ 0.22
COL5A1-203ENST00000460264 CYBRD1Q53TN4 286 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF627Q7L945 461 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 SLC46A3Q7Z3Q1 461 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 MDP1Q86V88 176 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 MICU2Q8IYU8 434 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 OR6N1Q8NGY5 312 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 FBXO17Q96EF6 278 aa16.43■□□□□ 0.22
COL5A1-203ENST00000460264 POLR2J2Q9GZM3 115 aaKnown RBP16.43■□□□□ 0.22
COL5A1-203ENST00000460264 POLR2J3Q9H1A7 115 aaKnown RBP16.43■□□□□ 0.22
COL5A1-203ENST00000460264 JMJD1CQ15652 2540 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 INAFM1C9JVW0 142 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 PDE5AO76074 875 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 OR5F1O95221 314 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 HLA-HP01893 362 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 HIST1H2ABP04908 130 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 UMPSP11172 480 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 B4GALT1P15291 398 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 KDELR2P33947 212 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 ARR3P36575 388 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 RBM34P42696 430 aaKnown RBP16.42■□□□□ 0.22
COL5A1-203ENST00000460264 OR1E2P47887 323 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 CSNK1A1P48729 337 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 CLEC2AQ6UVW9 174 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF813Q6ZN06 617 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 SLC35D2Q76EJ3 337 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 HIST3H2AQ7L7L0 130 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 NANOGNBQ7Z5D8 188 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 ARPINQ7Z6K5 226 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 NKAIN4Q8IVV8 208 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF525Q8N782 197 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 OR10H5Q8NGA6 315 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 OR4F15Q8NGB8 312 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 OR6X1Q8NH79 312 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 RP9Q8TA86 221 aaKnown RBP16.42■□□□□ 0.22
COL5A1-203ENST00000460264 TMEM255BQ8WV15 326 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 HIST1H2ACQ93077 130 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 RHNO1Q9BSD3 238 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 NOX3Q9HBY0 568 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 CMTM6Q9NX76 183 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 B3GNT2Q9NY97 397 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 RIMS3Q9UJD0 308 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 POFUT2Q9Y2G5 429 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 PMF1-BGLAPU3KQ54 211 aa16.42■□□□□ 0.22
COL5A1-203ENST00000460264 IGHV2OR16-5A0A0B4J2B6 119 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 ELOVL7A1L3X0 281 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 RNF13O43567 381 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 MT-ND1P03886 318 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 COX4I1P13073 169 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 SERPINF1P36955 418 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 EFNA4P52798 201 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 UGT2B15P54855 530 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 DSCR9P59020 149 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 SNRPD2P62316 118 aaKnown RBP16.41■□□□□ 0.22
COL5A1-203ENST00000460264 HGFACQ04756 655 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 PIN1Q13526 163 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-203ENST00000460264 ADIPOQQ15848 244 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 VHLLQ6RSH7 139 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 NUP37Q8NFH4 326 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 PFN4Q8NHR9 129 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 TMEM54Q969K7 222 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 FOXB1Q99853 325 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF224Q9NZL3 707 aa16.41■□□□□ 0.22
COL5A1-203ENST00000460264 GMPR2Q9P2T1 348 aaKnown RBP16.41■□□□□ 0.22
COL5A1-203ENST00000460264 ABCA2Q9BZC7 2435 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 YLPM1P49750 1951 aaKnown RBP16.4■□□□□ 0.22
COL5A1-203ENST00000460264 A0A096LNT2 108 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 CCDC22O60826 627 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 OR4A8P0C604 315 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 THRBP10828 461 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 CD79AP11912 226 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 MELKQ14680 651 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 EFNB3Q15768 340 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 GSG1Q2KHT4 349 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 SLC15A3Q8IY34 581 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 SLC25A44Q96H78 314 aaPredicted RBP16.4■□□□□ 0.22
COL5A1-203ENST00000460264 TPD52L3Q96J77 140 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF442Q9H7R0 627 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms