RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 LPAR3Q9UBY5 353 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 NOX1Q9Y5S8 564 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 IGHV2OR16-5A0A0B4J2B6 119 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 LOC102725191A0A1B0GVB3 256 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 MS4A18H0YCH9 400 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 hCG_2039718K7EN88 272 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 M0QX08 132 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 NDUFS8O00217 210 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 KPNA4O00629 521 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 IGHV4-31P0DP07 118 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 NPR2P20594 1047 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 THBS4P35443 961 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 LSM11P83369 360 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 SNTB2Q13425 540 aaKnown RBP13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 MS4A18Q3C1V0 323 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 ZNF613Q6PF04 617 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 ZNF813Q6ZN06 617 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 PTOV1Q86YD1 416 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 SLC30A8Q8IWU4 369 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 CCDC36Q8IYA8 594 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 SLC41A3Q96GZ6 507 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 TXNDC15Q96J42 360 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 ARHGDIGQ99819 225 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 TMEM43Q9BTV4 400 aa13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-204ENST00000457942 SH3PXD2BA1X283 911 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF503-AS2A6NEH8 195 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 CHP2O43745 196 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 TPST2O60704 377 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 FMO6PO60774 539 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 MT-ATP6P00846 226 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 HLA-HP01893 362 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 APEHP13798 732 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 B4GALT1P15291 398 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 CSNK1A1P48729 337 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 GZMKP49863 264 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 PPOXP50336 477 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 PCBP3P57721 371 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 HGFACQ04756 655 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 PIGFQ07326 219 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 DAG1Q14118 895 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 EFNB3Q15768 340 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 DUSP7Q16829 419 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 GSG1Q2KHT4 349 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 ENTPD8Q5MY95 495 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 PATL1Q86TB9 770 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 RETREG3Q86VR2 466 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 DPP10Q8N608 796 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 OR6T1Q8NGN1 323 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 OR5J2Q8NH18 312 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 PLK3Q9H4B4 646 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF442Q9H7R0 627 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 NOX3Q9HBY0 568 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 FGFR1OP2Q9NVK5 253 aa13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 FBXO9Q9UK97 447 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-204ENST00000457942 LOC390937A0A1W2PQ73 354 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 PLPP3O14495 311 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 LMX1BO60663 402 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 RAB36O95755 333 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 CH25HO95992 272 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 UMPSP11172 480 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 PCGF2P35227 344 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 NR4A2P43354 598 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 PTDSS1P48651 473 aaKnown RBP13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 BIDP55957 195 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 TTC33Q6PID6 262 aaPredicted RBP13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 PXKQ7Z7A4 578 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 IL17RDQ8NFM7 739 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 GPR32P1Q8NGA4 272 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 OR10A6Q8NH74 314 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 STON2Q8WXE9 905 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 LRR1Q96L50 414 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 FOXB1Q99853 325 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 SIKE1Q9BRV8 207 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 MED4Q9NPJ6 270 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 SLC7A7Q9UM01 511 aa13.63□□□□□ -0.23
CHCHD3-204ENST00000457942 TENM1Q9UKZ4 2725 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 RNF13O43567 381 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 HIST1H2ABP04908 130 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 IFNGR1P15260 489 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 CD247P20963 164 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 LSP1P33241 339 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 GALK2Q01415 458 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 NPTX1Q15818 432 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 TRMT5Q32P41 509 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 GKAP1Q5VSY0 366 aaPredicted RBP13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 FAM166AQ6J272 317 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 HIST3H2AQ7L7L0 130 aa13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 RBM45Q8IUH3 476 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-204ENST00000457942 ZNF540Q8NDQ6 660 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms