RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SMAP2Q8WU79 429 aaPredicted RBP20.29■□□□□ 0.84
CBX3-204ENST00000456948 LIPHQ8WWY8 451 aa20.29■□□□□ 0.84
CBX3-204ENST00000456948 ZNF566Q969W8 418 aa20.29■□□□□ 0.84
CBX3-204ENST00000456948 NSL1Q96IY1 281 aa20.29■□□□□ 0.84
CBX3-204ENST00000456948 ULBP2Q9BZM5 246 aa20.29■□□□□ 0.84
CBX3-204ENST00000456948 DCAF13Q9NV06 445 aaKnown RBP20.29■□□□□ 0.84
CBX3-204ENST00000456948 ALPK2Q86TB3 2170 aa20.29■□□□□ 0.84
CBX3-204ENST00000456948 HIVEP1P15822 2718 aa20.29■□□□□ 0.84
CBX3-204ENST00000456948 ARPC4-TTLL3A0A0A6YYG9 625 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 MCIDASD6RGH6 385 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 TCN1P20061 433 aaPredicted RBP20.28■□□□□ 0.84
CBX3-204ENST00000456948 DAP3P51398 398 aaKnown RBP20.28■□□□□ 0.84
CBX3-204ENST00000456948 CDH11P55287 796 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 SLC25A3Q00325 362 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 ANKDD1AQ495B1 522 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 ZNF730Q6ZMV8 503 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 SLC46A3Q7Z3Q1 461 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 DEFB107AQ8IZN7 70 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 KBTBD8Q8NFY9 601 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 MCUR1Q96AQ8 359 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 BPIFA2Q96DR5 249 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 SLC25A44Q96H78 314 aaPredicted RBP20.28■□□□□ 0.84
CBX3-204ENST00000456948 ANKRD19PQ9H560 264 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 ADAM21Q9UKJ8 722 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 LAMP3Q9UQV4 416 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 ENPP4Q9Y6X5 453 aa20.28■□□□□ 0.84
CBX3-204ENST00000456948 A0A096LPE4 126 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 A0A1W2PPZ6 126 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 SAGP10523 405 aaPredicted RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 IFI30P13284 250 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 RPS4XP62701 263 aaKnown RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 TAF11Q15544 211 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 LINGO2Q7L985 606 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 TGIF2LYQ8IUE0 185 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 ARHGAP24Q8N264 748 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 FITM2Q8N6M3 262 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 FAM169BQ8N8A8 192 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 ACOT11Q8WXI4 607 aaPredicted RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 NANOS1Q8WY41 292 aaKnown RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 GTPBP3Q969Y2 492 aaKnown RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 TRMT61AQ96FX7 289 aaKnown RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 NSMCE2Q96MF7 247 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 NDEL1Q9GZM8 345 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 KRCC1Q9NPI7 259 aaPredicted RBP20.27■□□□□ 0.84
CBX3-204ENST00000456948 INIPQ9NRY2 104 aa20.27■□□□□ 0.84
CBX3-204ENST00000456948 B2RBV5 119 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 IGHG1P01857 330 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 NR2C1P13056 603 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 RHCEP18577 417 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 CALB2P22676 271 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 CAPZA2P47755 286 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 RPL18Q07020 188 aaKnown RBP20.26■□□□□ 0.83
CBX3-204ENST00000456948 C3orf36Q3SXR2 165 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 AGAP6Q5VW22 663 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 NHLRC1Q6VVB1 395 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 C20orf141Q9NUB4 165 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 GLTPQ9NZD2 209 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 RHCGQ9UBD6 479 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 SNX13Q9Y5W8 968 aa20.26■□□□□ 0.83
CBX3-204ENST00000456948 ITPR3Q14573 2671 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 CENPBD1B2RD01 187 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 SHISA9B4DS77 424 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 J3KTA2 159 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 CRYAAP02489 173 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 BMP4P12644 408 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 CD99P14209 185 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 ARR3P36575 388 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 SLC9A3P48764 834 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 CLRN1P58418 232 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 SMIM11AP58511 58 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 PRSS57Q6UWY2 283 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 NRMQ8IXM6 262 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 FBXL14Q8N1E6 418 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 LILRB1Q8NHL6 650 aaPredicted RBP20.25■□□□□ 0.83
CBX3-204ENST00000456948 PYURFQ96I23 114 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 SLC38A2Q96QD8 506 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 DHRS9Q9BPW9 319 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 GSX2Q9BZM3 304 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 NMNAT1Q9HAN9 279 aaPredicted RBP20.25■□□□□ 0.83
CBX3-204ENST00000456948 CD300AQ9UGN4 299 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 TMEM5Q9Y2B1 443 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 ATP23Q9Y6H3 246 aa20.25■□□□□ 0.83
CBX3-204ENST00000456948 RAI1Q7Z5J4 1906 aaPredicted RBP20.24■□□□□ 0.83
CBX3-204ENST00000456948 VSTM5A8MXK1 200 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 EFCAB9A8MZ26 197 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 H1F0P07305 194 aaKnown RBP20.24■□□□□ 0.83
CBX3-204ENST00000456948 AQP2P41181 271 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 ADAM8P78325 824 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 PRKCDQ05655 676 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 FXNQ16595 210 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 ALG10Q5BKT4 473 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 ZNF813Q6ZN06 617 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 MBOAT2Q6ZWT7 520 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 OAFQ86UD1 273 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 FAM156AQ8NDB6 213 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 IL17RDQ8NFM7 739 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 PERPQ96FX8 193 aa20.24■□□□□ 0.83
CBX3-204ENST00000456948 FFAR1O14842 300 aa20.23■□□□□ 0.83
CBX3-204ENST00000456948 FARS2O95363 451 aaKnown RBP20.23■□□□□ 0.83
CBX3-204ENST00000456948 F13BP05160 661 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms