RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 RAB35Q15286 201 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 CYBRD1Q53TN4 286 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 SLC35D2Q76EJ3 337 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 LRRC17Q8N6Y2 441 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 ULBP2Q9BZM5 246 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 MEPEQ9NQ76 525 aaPredicted RBP18.47■□□□□ 0.55
HMGB3-205ENST00000455596 POFUT2Q9Y2G5 429 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 RNF223E7ERA6 249 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 H7C417 338 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 RNF13O43567 381 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 SEC14L2O76054 403 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 OR5F1O95221 314 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 ARR3P36575 388 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 RBM34P42696 430 aaKnown RBP18.46■□□□□ 0.55
HMGB3-205ENST00000455596 CAPZA2P47755 286 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 NUDT6P53370 316 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 SELENOWP63302 87 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 DNM1P46Q6ZS02 220 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 SLC46A3Q7Z3Q1 461 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 WDFY1Q8IWB7 410 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 OR6X1Q8NH79 312 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 TPD52L3Q96J77 140 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 REG4Q9BYZ8 158 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 CMTM6Q9NX76 183 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 RIMS3Q9UJD0 308 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 PMF1-BGLAPU3KQ54 211 aa18.46■□□□□ 0.55
HMGB3-205ENST00000455596 MT-ND1P03886 318 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 CSNK1A1P48729 337 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 IDH3GP51553 393 aaPredicted RBP18.45■□□□□ 0.54
HMGB3-205ENST00000455596 PIN1Q13526 163 aaPredicted RBP18.45■□□□□ 0.54
HMGB3-205ENST00000455596 KRTAP21-3Q3LHN1 58 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 ZNF813Q6ZN06 617 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 ZNF627Q7L945 461 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 NANOGNBQ7Z5D8 188 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 NKAIN4Q8IVV8 208 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 SLC15A3Q8IY34 581 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 TMEM255BQ8WV15 326 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 SEC61A2Q9H9S3 476 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 EFCAB1Q9HAE3 211 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 CA10Q9NS85 328 aa18.45■□□□□ 0.54
HMGB3-205ENST00000455596 ZNF503-AS2A6NEH8 195 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 CELA3BP08861 270 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 THRBP10828 461 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 CALCRP30988 508 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 UGT2B15P54855 530 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 NPRL3Q12980 569 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 SPATA21Q7Z572 469 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 MDP1Q86V88 176 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 OR4F15Q8NGB8 312 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 PFN4Q8NHR9 129 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 TMEM239Q8WW34 195 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 NANOS1Q8WY41 292 aaKnown RBP18.44■□□□□ 0.54
HMGB3-205ENST00000455596 LZICQ8WZA0 190 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 FBXO17Q96EF6 278 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 FOXB1Q99853 325 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 HOPXQ9BPY8 73 aaPredicted RBP18.44■□□□□ 0.54
HMGB3-205ENST00000455596 ELAC2Q9BQ52 826 aaKnown RBP18.44■□□□□ 0.54
HMGB3-205ENST00000455596 RHNO1Q9BSD3 238 aa18.44■□□□□ 0.54
HMGB3-205ENST00000455596 BLOC1S5-TXNDC5H3BN57 136 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 OR7A10O76100 309 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 IGF2P01344 180 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 FUT1P19526 365 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 LIPEQ05469 1076 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 MELKQ14680 651 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 SWI5Q1ZZU3 235 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 GSG1Q2KHT4 349 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 MYPOPQ86VE0 399 aaPredicted RBP18.43■□□□□ 0.54
HMGB3-205ENST00000455596 HTRA1Q92743 480 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 TMEM54Q969K7 222 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 ZNF566Q969W8 418 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 SGTBQ96EQ0 304 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 SLC25A44Q96H78 314 aaPredicted RBP18.43■□□□□ 0.54
HMGB3-205ENST00000455596 PRRC1Q96M27 445 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 GLTPQ9NZD2 209 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 MED31Q9Y3C7 131 aa18.43■□□□□ 0.54
HMGB3-205ENST00000455596 CHD3Q12873 2000 aaKnown RBP18.43■□□□□ 0.54
HMGB3-205ENST00000455596 GSTA4O15217 222 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 PDE5AO76074 875 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 BCL10O95999 233 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 HLA-HP01893 362 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 CD79AP11912 226 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 B4GALT1P15291 398 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 IFNA8P32881 189 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 SERPINF1P36955 418 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 DSCR9P59020 149 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 SNRPD2P62316 118 aaKnown RBP18.42■□□□□ 0.54
HMGB3-205ENST00000455596 ST3GAL3Q11203 375 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 MST1LQ2TV78 715 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 VHLLQ6RSH7 139 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 CLEC2AQ6UVW9 174 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 HACD2Q6Y1H2 254 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 TREML1Q86YW5 311 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 MAPK1IP1LQ8NDC0 245 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 NUP37Q8NFH4 326 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 IL17RDQ8NFM7 739 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 C20orf141Q9NUB4 165 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 B3GNT2Q9NY97 397 aa18.42■□□□□ 0.54
HMGB3-205ENST00000455596 GMPR2Q9P2T1 348 aaKnown RBP18.42■□□□□ 0.54
HMGB3-205ENST00000455596 YLPM1P49750 1951 aaKnown RBP18.42■□□□□ 0.54
HMGB3-205ENST00000455596 A0A1W2PRG6 482 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms