RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GPR137CQ8N3F9 429 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 MOSPD2Q8NHP6 518 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 IGFBPL1Q8WX77 278 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ASB10Q8WXI3 467 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 BCL2L2Q92843 193 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-205ENST00000454542 HIST1H2ACQ93077 130 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 MUCL1Q96DR8 90 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF837Q96EG3 531 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-205ENST00000454542 CLPTM1LQ96KA5 538 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 MAGIXQ9H6Y5 334 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 TMEM5Q9Y2B1 443 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 FAM32AQ9Y421 112 aaKnown RBP12.41□□□□□ -0.42
HDAC4-205ENST00000454542 SPG11Q96JI7 2443 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 DPRXA6NFQ7 191 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF99A8MXY4 864 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CLOCKO15516 846 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 SERPINI2O75830 405 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 OMPP47874 163 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CSNK1A1P48729 337 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 BSPH1Q075Z2 132 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CAMK2DQ13557 499 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 MELKQ14680 651 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 TESK1Q15569 626 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 HIST3H3Q16695 136 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 HIKESHIQ53FT3 197 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 ARMC4Q5T2S8 1044 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 HMBOX1Q6NT76 420 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 TBPL2Q6SJ96 375 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 DHFR2Q86XF0 187 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 NOXO1Q8NFA2 376 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 OR13C2Q8NGS9 318 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 OR52N5Q8NH56 324 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 POP5Q969H6 163 aaKnown RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 MCUR1Q96AQ8 359 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CCDC124Q96CT7 223 aaKnown RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 NMD3Q96D46 503 aaKnown RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 MBD6Q96DN6 1003 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 SLC25A44Q96H78 314 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 MRPL13Q9BYD1 178 aaKnown RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 ESRP2Q9H6T0 727 aaKnown RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CRLF2Q9HC73 371 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 INIPQ9NRY2 104 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 CRNNQ9UBG3 495 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 RNF115Q9Y4L5 304 aa12.4□□□□□ -0.42
HDAC4-205ENST00000454542 MAGED1Q9Y5V3 778 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-205ENST00000454542 TRAV27A0A087WT01 109 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 SH3PXD2BA1X283 911 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 EFCAB9A8MZ26 197 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 BLOC1S5-TXNDC5H3BN57 136 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 KRT33AO76009 404 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 PLAUP00749 431 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 RAF1P04049 648 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 F13BP05160 661 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 SAGP10523 405 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF26P17031 533 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 CD53P19397 219 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 PAX7P23759 505 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 HOXC12P31275 282 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 GPR4P46093 362 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 DAP3P51398 398 aaKnown RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 SPIBQ01892 262 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 TRAP1Q12931 704 aaKnown RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 TAF11Q15544 211 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ACKR1Q16570 336 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 FGD3Q5JSP0 725 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 CARD17Q5XLA6 110 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 C20orf204Q6ZNR8 217 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 HDDC2Q7Z4H3 204 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 MEX3DQ86XN8 651 aaKnown RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ZDHHC21Q8IVQ6 265 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 OR4K5Q8NGD3 323 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 LILRB1Q8NHL6 650 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF566Q969W8 418 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF347Q96SE7 839 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 GPX7Q96SL4 187 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 BTBD10Q9BSF8 475 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 THTPAQ9BU02 230 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ULBP2Q9BZM5 246 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 TXNIPQ9H3M7 391 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 B3GAT2Q9NPZ5 323 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 GLTPQ9NZD2 209 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 STX18Q9P2W9 335 aaKnown RBP12.39□□□□□ -0.43
HDAC4-205ENST00000454542 AKAP6Q13023 2319 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
HDAC4-205ENST00000454542 MYO9AB2RTY4 2548 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 A0A1W2PR80 420 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 A0A1W2PRG6 482 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 M0R3G1 203 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 GYG2O15488 501 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 BCL10O95999 233 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 IGLV1-44P01699 117 aa12.38□□□□□ -0.43
HDAC4-205ENST00000454542 IGHG1P01857 330 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms