RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 TRIM64BA6NI03 449 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 ATP6V1G2-DDX39BF2Z307 99 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 H7C1Q1 480 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 NDUFS7O75251 213 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 OR7A10O76100 309 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 IFNGR1P15260 489 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 BIDP55957 195 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF544Q6NX49 715 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 SLC35D2Q76EJ3 337 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 CPLX4Q7Z7G2 160 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 BIVMQ86UB2 503 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 MYPOPQ86VE0 399 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-207ENST00000453796 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 OR6X1Q8NH79 312 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 TMEM54Q969K7 222 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 TRMT61AQ96FX7 289 aaKnown RBP12.68□□□□□ -0.38
HSPG2-207ENST00000453796 ADAD1Q96M93 576 aaKnown RBP12.68□□□□□ -0.38
HSPG2-207ENST00000453796 HS6ST2Q96MM7 605 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 BDH2Q9BUT1 245 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 SEC61A2Q9H9S3 476 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 MAN2C1Q9NTJ4 1040 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 CBLN4Q9NTU7 201 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 MOKQ9UQ07 419 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
HSPG2-207ENST00000453796 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF726A6NNF4 738 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 FFAR1O14842 300 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 RNF13O43567 381 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 SERPINI2O75830 405 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 SEC14L2O76054 403 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 PRSS23O95084 383 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 OR6A2O95222 327 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 IGHV4-39P01824 125 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 CECR9P0C854 216 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 UMPSP11172 480 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 CBR1P16152 277 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 FUT1P19526 365 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 PSME3P61289 254 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 GNGT1P63211 74 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 NAAAQ02083 359 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 RPL18Q07020 188 aaKnown RBP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 ST3GAL3Q11203 375 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 MELKQ14680 651 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 DNM1P46Q6ZS02 220 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 NANOGNBQ7Z5D8 188 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 TSEN54Q7Z6J9 526 aaKnown RBP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 OFCC1Q8IZS5 231 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 MUC15Q8N387 334 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 LZICQ8WZA0 190 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 SGTBQ96EQ0 304 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF75AQ96N20 296 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 ULBP2Q9BZM5 246 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 MOV10Q9HCE1 1003 aaKnown RBP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 B3GAT2Q9NPZ5 323 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 B3GNT2Q9NY97 397 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF224Q9NZL3 707 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 GDF2Q9UK05 429 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-207ENST00000453796 ATP23Q9Y6H3 246 aa12.67□□□□□ -0.38
HSPG2-207ENST00000453796 J3KTA2 159 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 NDUFAB1O14561 156 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 PIP5K1CO60331 668 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 SERPINA1P01009 418 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 HIST1H2ABP04908 130 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 CELA3BP08861 270 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 PGA4P0DJD7 388 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 PGA3P0DJD8 388 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 CALCRP30988 508 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 APOBEC3AP31941 199 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-207ENST00000453796 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 FABP6P51161 128 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 ETFDHQ16134 617 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 IFI44LQ53G44 452 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 HIST3H2AQ7L7L0 130 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 FBXL14Q8N1E6 418 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 OR6N1Q8NGY5 312 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 GEMIN6Q8WXD5 167 aaKnown RBP12.66□□□□□ -0.38
HSPG2-207ENST00000453796 HIST1H2ACQ93077 130 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 SLC25A44Q96H78 314 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-207ENST00000453796 FOXB1Q99853 325 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 KCTD14Q9BQ13 255 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-207ENST00000453796 CACNG6Q9BXT2 260 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 MED31Q9Y3C7 131 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 ZANQ9Y493 2812 aa12.66□□□□□ -0.38
HSPG2-207ENST00000453796 YLPM1P49750 1951 aaKnown RBP12.66□□□□□ -0.38
HSPG2-207ENST00000453796 BLOC1S5-TXNDC5H3BN57 136 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 GSTA4O15217 222 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF682O95780 498 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 CRYAAP02489 173 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 IFNW1P05000 195 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 NCK1P16333 377 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 ACVR1BP36896 505 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 YAP1P46937 504 aaKnown RBP12.65□□□□□ -0.38
HSPG2-207ENST00000453796 TNK1Q13470 666 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms