RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 HPRP00739 348 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 TFP02787 698 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ARAFP10398 606 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 CD79AP11912 226 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ZNF35P13682 527 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 B4GALT1P15291 398 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ACHEP22303 614 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PPIBP23284 216 aaKnown RBP9.37□□□□□ -0.91
USP1-204ENST00000452143 LSP1P33241 339 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 STX1BP61266 288 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PRR20EP86478 221 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PRR20CP86479 221 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PRR20DP86480 221 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PRR20BP86481 221 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PRR20AP86496 221 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 GALK2Q01415 458 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 CCNIQ14094 377 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 FXNQ16595 210 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 GCNT6Q5T4J0 391 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 SLC2A7Q6PXP3 512 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ZNF813Q6ZN06 617 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 RINLQ6ZS11 566 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PXKQ7Z7A4 578 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 MGARPQ8TDB4 240 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ZNF75AQ96N20 296 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 OR52B2Q96RD2 323 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 FOXB1Q99853 325 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 TMEM43Q9BTV4 400 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ULBP2Q9BZM5 246 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ZNF385DQ9H6B1 395 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 MRPL39Q9NYK5 338 aaKnown RBP9.37□□□□□ -0.91
USP1-204ENST00000452143 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.37□□□□□ -0.91
USP1-204ENST00000452143 SLC7A8Q9UHI5 535 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 POFUT2Q9Y2G5 429 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 V9GYY5 206 aaPredicted RBP9.37□□□□□ -0.91
USP1-204ENST00000452143 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 MS4A18H0YCH9 400 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 GPR37O15354 613 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 MT-ATP6P00846 226 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 BGLAPP02818 100 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 SAGP10523 405 aaPredicted RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 HLA-DOBP13765 273 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 GPR6P46095 362 aaPredicted RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 PTDSS1P48651 473 aaKnown RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 RGS8P57771 180 aaPredicted RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 CDK6Q00534 326 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 PMS2P3Q13401 168 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 MS4A18Q3C1V0 323 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 ELFN2Q5R3F8 820 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 GKAP1Q5VSY0 366 aaPredicted RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 CARD17Q5XLA6 110 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 COMTD1Q86VU5 262 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 RANBP3LQ86VV4 465 aaPredicted RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 TEX29Q8N6K0 151 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 OR6N1Q8NGY5 312 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 NFKBIDQ8NI38 313 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 RDH5Q92781 318 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 TMEM186Q96B77 213 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 ZNF607Q96SK3 696 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 EMC6Q9BV81 110 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 ZNF416Q9BWM5 594 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 RSPO3Q9BXY4 272 aaPredicted RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 PARD6BQ9BYG5 372 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 RACGAP1Q9H0H5 632 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 TMEM38AQ9H6F2 299 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 TMEM27Q9HBJ8 222 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 MED29Q9NX70 200 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 NKIRAS1Q9NYS0 192 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 SLC25A37Q9NYZ2 338 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 ZNF224Q9NZL3 707 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 REV1Q9UBZ9 1251 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 SLC13A4Q9UKG4 626 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 RAB21Q9UL25 225 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 ZNF346Q9UL40 294 aaKnown RBP9.36□□□□□ -0.91
USP1-204ENST00000452143 CORO2BQ9UQ03 480 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 GRIP1Q9Y3R0 1128 aa9.36□□□□□ -0.91
USP1-204ENST00000452143 ZNF726A6NNF4 738 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 LYNX1G3V0Z9 82 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 FMO6PO60774 539 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 SERPINB7O75635 380 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 MSMBP08118 114 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 LYNX1P0DP58 116 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 CBLP22681 906 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 GIPRP48546 466 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 CSNK1A1P48729 337 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 TMEM33P57088 247 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 RAB1AP62820 205 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 PIGFQ07326 219 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 CAMK2DQ13557 499 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 OR1Q1Q15612 314 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 MSMPQ1L6U9 139 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 MMEL1Q495T6 779 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 GLIPR1L2Q4G1C9 344 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 EPGNQ6UW88 154 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 NHLRC1Q6VVB1 395 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 PIWIL3Q7Z3Z3 882 aaKnown RBP9.35□□□□□ -0.91
USP1-204ENST00000452143 MSRB3Q8IXL7 192 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 SEMA6DQ8NFY4 1073 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 OR51F2Q8NH61 342 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms