RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 NANOS1Q8WY41 292 aaKnown RBP10.82□□□□□ -0.68
CPSF4-208ENST00000452047 MPP4Q96JB8 637 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 SORCS2Q96PQ0 1159 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 PRSS27Q9BQR3 290 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 NOX3Q9HBY0 568 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 B3GNT2Q9NY97 397 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF224Q9NZL3 707 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 USP22Q9UPT9 525 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 BBIP1A8MTZ0 92 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 C11orf98E9PRG8 122 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 MRASO14807 208 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 CH25HO95992 272 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 F12P00748 615 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-208ENST00000452047 TP53P04637 393 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-208ENST00000452047 CSF3P09919 207 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 OR4A8P0C604 315 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ASAH2BP0C7U1 165 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ADORA3P0DMS8 318 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 SLC25A16P16260 332 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 AHCYP23526 432 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ARR3P36575 388 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ARFIP2P53365 341 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 SNRPD2P62316 118 aaKnown RBP10.81□□□□□ -0.68
CPSF4-208ENST00000452047 LOXL1Q08397 574 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ZP4Q12836 540 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 NPRL3Q12980 569 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 TMEM249Q2WGJ8 235 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 TTC33Q6PID6 262 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-208ENST00000452047 SNX32Q86XE0 403 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 LRRC17Q8N6Y2 441 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 SLC26A7Q8TE54 656 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 FAM168AQ92567 244 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF75AQ96N20 296 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF583Q96ND8 569 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 TNFRSF13CQ96RJ3 184 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 SH3GL1Q99961 368 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ULBP2Q9BZM5 246 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 SLC19A3Q9BZV2 496 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 PLK3Q9H4B4 646 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF442Q9H7R0 627 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 MEPEQ9NQ76 525 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-208ENST00000452047 NANSQ9NR45 359 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 TAS2R5Q9NYW4 299 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 COL6A5A8TX70 2615 aa10.81□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 B9A039 149 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 KPNA4O00629 521 aaPredicted RBP10.8□□□□□ -0.68
CPSF4-208ENST00000452047 SERPINI2O75830 405 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 HLA-HP01893 362 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 IFNGR1P15260 489 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 B4GALT1P15291 398 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 TNFRSF1BP20333 461 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 PPOXP50336 477 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 BIDP55957 195 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 VLDLRP98155 873 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 SF3A3Q12874 501 aaKnown RBP eCLIP10.8□□□□□ -0.683e-6■■■■□ 19.7
CPSF4-208ENST00000452047 MAPRE2Q15555 327 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 MMEL1Q495T6 779 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 VHLLQ6RSH7 139 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF813Q6ZN06 617 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 SLC35D2Q76EJ3 337 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 SLC46A3Q7Z3Q1 461 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 CARM1Q86X55 608 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 OR6X1Q8NH79 312 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 TMEM54Q969K7 222 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 FOXB1Q99853 325 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 ECSITQ9BQ95 431 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 CCDC134Q9H6E4 229 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 B3GAT2Q9NPZ5 323 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF229Q9UJW7 825 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 SH3GLB1Q9Y371 365 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 FKBP7Q9Y680 259 aa10.8□□□□□ -0.68
CPSF4-208ENST00000452047 RTTNQ86VV8 2226 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 VWC2LB2RUY7 222 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 OR6A2O95222 327 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 VIMP08670 466 aaKnown RBP10.79□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF14P17017 642 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-208ENST00000452047 THBS4P35443 961 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 CAPZA2P47755 286 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 CSNK1A1P48729 337 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 GUCY1A3Q02108 690 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 GSG1Q2KHT4 349 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 C6orf52Q5T4I8 152 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 ERICH5Q6P6B1 374 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 ANKS4BQ8N8V4 417 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 IL17RDQ8NFM7 739 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 C10orf82Q8WW14 230 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 PROX1Q92786 737 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 MS4A3Q96HJ5 214 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 POLR2J2Q9GZM3 115 aaKnown RBP10.79□□□□□ -0.68
CPSF4-208ENST00000452047 POLR2J3Q9H1A7 115 aaKnown RBP10.79□□□□□ -0.68
CPSF4-208ENST00000452047 BAG5Q9UL15 447 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 POFUT2Q9Y2G5 429 aa10.79□□□□□ -0.68
CPSF4-208ENST00000452047 LOC100653049A0A140TA62 436 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 TMEM129A0AVI4 362 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 FAM220BPB1ANY3 271 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 hCG_2039718K7EN88 272 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 RNF13O43567 381 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 SHOX2O60902 331 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms